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Relevance to Autism

Rare mutation (Barber et al., 1994) and genetic association (Zhou et al., 2007) of the APC gene has been identified with autism.

Molecular Function

The encoded protein is a tumor suppressor.

External Links

        

References

Type
Title
Type of Disorder
Associated Disorders
Author, Year
Primary
Adenomatous polyposis coli and a cytogenetic deletion of chromosome 5 resulting from a maternal intrachromosomal insertion.
ASD
adenomatous polyposis coli
Positive Association
Association of adenomatous polyposis coli (APC) gene polymorphisms with autism spectrum disorder (ASD).
ASD
Highly Cited
Activation of beta-catenin-Tcf signaling in colon cancer by mutations in beta-catenin or APC.
Recent Recommendation
Alterations of the Wnt signaling pathway during the neoplastic progression of Barrett\'s esophagus.
Recent recommendation
APC is an RNA-binding protein, and its interactome provides a link to neural development and microtubule assembly.
Recent recommendation
Adenomatous polyposis coli protein deletion leads to cognitive and autism-like disabilities.
Recent Recommendation
The postsynaptic adenomatous polyposis coli (APC) multiprotein complex is required for localizing neuroligin and neurexin to neuronal nicotinic synapses in vivo.
Recent Recommendation
Adenomatous polyposis coli and Asef function downstream of hepatocyte growth factor and phosphatidylinositol 3-kinase.
Recent Recommendation
A two-step model for colon adenoma initiation and progression caused by APC loss.

Rare

Variant ID
Variant Type
Allele Change
Residue Change
Inheritance Pattern
Inheritance Association
Family Type
Author, Year
 GEN013R001 
 copy_number_loss 
 N/A 
 N/A 
 De novo 
  
 Simplex 

Common

Variant ID
Polymorphism
SNP ID
Allele Change
Residue Change
Population Origin
Population Stage
Author, Year
 GEN013C001 
 3_prime_UTR_variant 
 rs1804197 
 C8636A 
 N/A 
 Swedish 
 Discovery 



Model Summary

The conditional knock out of the Apc gene from the forebrain excitatory neurons causes several beavioral and learning abnormalities, like deficits in spatial learning and memory; increased repetitive behavior and decreased sociability.

External Links

  MGI Logo  Entrez Gene

References

Type
Title
Author, Year
Primary
Adenomatous polyposis coli protein deletion leads to cognitive and autism-like disabilities.

APC_1_cKO_HM

Model Type: Genetic
Model Genotype: Homozygous
Mutation: This model was derived from the Apc flox 468 conditional ready knock out mouse line, which has the loxP sites flanking exons 11 and 12 of the gene. Crossing the original line with the CAMKII- cre mouse resulted in knocking out Apc ( as a truncated protein with only 468 amino acids is produced after cre mediated deletion takes place). CAMKII driven cre expression results in the loss of Apc only in forebrain post mitotic excitatory neurons
Allele Type: Targeted (conditional ready)
Strain of Origin: 129S6/SvEvTac
Genetic Background: 129S6/SvEvTac * C57BL/6
ES Cell Line: TC1/TC-1
Mutant ES Cell Line:
Model Source: JAX

APC_2_cKO_HM_Thy1-YFP

Model Type: Genetic
Model Genotype: Homozygous
Mutation: The Apc null mice, lacking the functional protein from forebrain excitatory neurons, were crossed with Thy1- YFP mice to visualize neuronal spines
Allele Type: Targeted (marker)
Strain of Origin: 129S6/SvEvTac
Genetic Background: 129S6/SvEvTac * C57BL/6
ES Cell Line:
Mutant ES Cell Line:
Model Source:

APC_1_cKO_HM

Category
Entity
Quantity
Experimental Paradigm
Age at Testing
Repetitive digging1
Increased
Description: Apc null mice show increased marble burying behavior compared to their littermates
 Marble-burying test
 Unreported
Perseveration1
Increased
Description: Apc null mice show increased repetitive behavior or perseveration in which the time spent in investigating four novel objects was more than littermate controls, indicating lack of habituation as well
 Repetitive novel object interaction test
 Unreported
Stereotypy1
Increased
Description: Apc null mice show increased stereotypy as the sequence at which they visit four objects is repeated, this is defined as a repetitive pattern and the specific or preferred sequence was repeated by them more times than control littermates
 Repetitive novel object interaction test
 Unreported
Social approach1
Decreased
Description: Apc null mice spend significantly less time interacting with a novel mouse compared to their wild type littermates. They do show a preference to novel mouse compared to an empty cage
 Three-chamber social approach test
 Unreported
Social scent marking or recognition1
Decreased
Description: Apc null mice have reduced preference or interest for social odors, compared to their wild type littermates. This is the same whether the odor was from a male or female cage
 Olfactory discrimination test: social odor
 Unreported
Anxiety1
Decreased
Description: Apc null mice have reduced anxiety and spend more time in open arms in the levated plus maze, compared to control littermates
 Elevated plus maze test
 Unreported
Spatial learning1
Decreased
Description: Apc null mice have decreased spatial learning ability as they take more trials to reach the goal hole, compared to control littermates who learn the location within lesser number of trials 3-4
Exp Paradigm: Barnes maze test was performed for 12 days
 Barnes maze test: latency to find goal hole, type of route
 Unreported
Spatial working memory1
Decreased
Description: Apc null mice make reduced spontaneous alternation, alternating rate not much higher than chance. Control littermates show higher alternation rates
 Y-maze test: spontaneous alternation
 Unreported
Spatial reference memory1
Decreased
Description: In the probe trial for barnes maze, Apc null mice have a decreased preferene for the location of the goal hole compared to control littermates
Exp Paradigm: Probe trials were performed on day 5 and day 12
 Barnes maze test: probe trial
 Unreported
Protein expression level evidence1
Decreased
Description: Apc null mice have decreased levels of presenilin1 in the hippocampus
 Western blot: hippocampus
 Unreported
Protein localization1
Increased
Description: Apc null mice have increased beta catenin localization in the nucleus in the hippocamal and striatal neurons
 Immunohistochemistry: fluorescence
 Unreported
Gene expression1
Increased
Description: Apc null mice have increased expression of Sp5, neurog1, syn2
 Quantitative PCR (qRT-PCR)
 Unreported
Protein expression level evidence1
Increased
Description: Apc null mice have increased levels of beta-catenin and beta-caenin associated N cadherin complexes in the forebrain and striatum
 Western blot: forebrain and striatum
 Unreported
Gait1
 No Change
 Footprint analysis: stride length measurement
 Unreported
General locomotor activity: Ambulatory activity1
 No Change
 Barnes maze test: average speed
 Unreported
Hyperactivity: Home cage/familiar environment1
 No Change
 Y-maze test; Home cage behavior
 Unreported
Olfaction1
 No Change
 Response to olfactory stimuli: non social odor
 Unreported
 Not Reported: Circadian sleep/wake cycle ,   Communications ,   Developmental profile ,   Homeostasis ,   Maternal behavior ,   Neuroanatomy / Ultrastructure / Cytoarchitecture ,   Neurophysiology ,   Seizure ,  

APC_2_cKO_HM_Thy1-YFP

Category
Entity
Quantity
Experimental Paradigm
Age at Testing
Dendritic spine density and architecture1
Increased
Description: Apc null mice (with Thy1-YFP) have increased spine density in the pyramidal neuronals of cortical layer V and hippocampal CA1 pyramidal neurons
 Golgi-Cox staining
 Unreported
 Not Reported: Circadian sleep/wake cycle ,   Communications ,   Developmental profile ,   Emotion ,   Homeostasis ,   Learning & memory ,   Maternal behavior ,   Molecular profile ,   Motor phenotype ,   Neurophysiology ,   Repetitive behavior ,   Seizure ,   Sensory ,   Social behavior ,  


Interactor Symbol Interactor Name Interactor Organism Entrez ID Uniprot ID Interaction Type Evidence Reference
11-Sep septin 11 52398 Q8C1B7 HITS-CLIP
Preitner N 2014
4932438A13Rik RIKEN cDNA 4932438A13 gene 229227 A2AAE1 HITS-CLIP
Preitner N 2014
6-Mar membrane-associated ring finger (C3HC4) 6 223455 Q6ZQ89 HITS-CLIP
Preitner N 2014
Abhd17c abhydrolase domain containing 17C 70178 Q8VCV1 HITS-CLIP
Preitner N 2014
Abi2 abl-interactor 2 329165 P62484 HITS-CLIP
Preitner N 2014
Acly ATP citrate lyase 104112 Q91V92 HITS-CLIP
Preitner N 2014
Actb actin, beta 11461 P60710 HITS-CLIP
Preitner N 2014
ACTN1 actinin, alpha 1 87 P12814 Y2H
Bandyopadhyay S 2010
Actr1a ARP1 actin-related protein 1A, centractin alpha 54130 P61164 HITS-CLIP
Preitner N 2014
Actr1b ARP1 actin-related protein 1B, centractin beta 226977 Q8R5C5 HITS-CLIP
Preitner N 2014
Aff4 AF4/FMR2 family, member 4 93736 Q9ESC8 HITS-CLIP
Preitner N 2014
AGFG1 ArfGAP with FG repeats 1 3267 P52594 Y2H
Bandyopadhyay S 2010
Akap11 A kinase (PRKA) anchor protein 11 219181 E9Q777 HITS-CLIP
Preitner N 2014
Amfr autocrine motility factor receptor 23802 Q9R049 HITS-CLIP
Preitner N 2014
Ank3 ankyrin 3, epithelial 11735 Q4U260 HITS-CLIP
Preitner N 2014
Ankrd12 Q6P211 HITS-CLIP
Preitner N 2014
ANKRD17 ankyrin repeat domain 17 26057 O75179 Y2H
Bandyopadhyay S 2010
Anp32a acidic (leucine-rich) nuclear phosphoprotein 32 family, member A 11737 O35381 HITS-CLIP
Preitner N 2014
Anp32e acidic (leucine-rich) nuclear phosphoprotein 32 family, member E 66471 P97822 HITS-CLIP
Preitner N 2014
ANXA7 annexin A7 310 P20073 Y2H
Bandyopadhyay S 2010
AP2B1 adaptor-related protein complex 2, beta 1 subunit 163 P63010 Y2H
Bandyopadhyay S 2010
APC adenomatous polyposis coli 324 P25054 IP/WB; in vitro binding assay
Su LK 1993
Araf v-raf murine sarcoma 3611 viral oncogene homolog 11836 P04627 HITS-CLIP
Preitner N 2014
Arhgap11a Rho GTPase activating protein 11A 228482 Q80Y19 HITS-CLIP
Preitner N 2014
ARHGEF4 Rho guanine nucleotide exchange factor (GEF) 4 50649 Q9NR80 Y2H; GST; IP/WB
Kawasaki Y 2000
Asap2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 211914 Q7SIG6 HITS-CLIP
Preitner N 2014
Atad1 ATPase family, AAA domain containing 1 67979 Q9D5T0 HITS-CLIP
Preitner N 2014
Atp2a2 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 11938 O55143 HITS-CLIP
Preitner N 2014
Atp5g3 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) 228033 P56384 HITS-CLIP
Preitner N 2014
Atp6ap2 ATPase, H+ transporting, lysosomal accessory protein 2 70495 Q9CYN9 HITS-CLIP
Preitner N 2014
Atxn7l3b ataxin 7-like 3B 382423 Q3UD01 HITS-CLIP
Preitner N 2014
AXIN1 axin 1 8312 O15169 in vitro binding assay; IP/WB
Nakamura T 1998
AXIN2 axin 2 8313 Q9Y2T1 IP/WB
von Kries JP 2000
Azin1 antizyme inhibitor 1 54375 O35484 HITS-CLIP
Preitner N 2014
Basp1 brain abundant, membrane attached signal protein 1 70350 Q91XV3 HITS-CLIP
Preitner N 2014
Brwd1 bromodomain and WD repeat domain containing 1 93871 Q921C3 HITS-CLIP
Preitner N 2014
BUB1 budding uninhibited by benzimidazoles 1 homolog (yeast) 699 O43683 IP/WB; in vitro kinase assay
Kaplan KB 2001
BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) 701 O60566 in vitro kinase assay
Kaplan KB 2001
BUB3 budding uninhibited by benzimidazoles 3 homolog (yeast) 9184 O43684 IP/WB; in vitro kinase assay
Kaplan KB 2001
C4A complement component 4A (Rodgers blood group) 720 P0C0L4 Y2H
Bandyopadhyay S 2010
Cadm1 cell adhesion molecule 1 54725 Q8R5M8 HITS-CLIP
Preitner N 2014
Cadm4 cell adhesion molecule 4 260299 Q8R464 HITS-CLIP
Preitner N 2014
Calm1 calmodulin 1 12313 P62204 HITS-CLIP
Preitner N 2014
Calr calreticulin 12317 P14211 HITS-CLIP
Preitner N 2014
Canx calnexin 12330 P35564 HITS-CLIP
Preitner N 2014
Cbx5 chromobox homolog 5 23468 P45973 HITS-CLIP
Preitner N 2014
Ccnd2 cyclin D2 12444 P30280 HITS-CLIP
Preitner N 2014
Ccnj cyclin J 240665 Q3TZI6 HITS-CLIP
Preitner N 2014
Cd24a CD24a antigen 12484 P24807 HITS-CLIP
Preitner N 2014
Cdc42 cell division cycle 42 12540 P60766 HITS-CLIP
Preitner N 2014
Cdk5r1 cyclin-dependent kinase 5, regulatory subunit 1 (p35) 12569 P61809 HITS-CLIP
Preitner N 2014
Cdkn1b cyclin-dependent kinase inhibitor 1B 12576 P46414 HITS-CLIP
Preitner N 2014
Celf3 CUGBP, Elav-like family member 3 78784 Q8CIN6 HITS-CLIP
Preitner N 2014
Celf4 CUGBP, Elav-like family member 4 108013 Q7TSY6 HITS-CLIP
Preitner N 2014
CGNL1 cingulin-like 1 84952 Q0VF96 Y2H
Bandyopadhyay S 2010
Chl1 "Processed neural cell adhesion molecule L1-like protein" 12661 P70232 HITS-CLIP
Preitner N 2014
Chtop chromatin target of PRMT1 66511 Q9CY57 HITS-CLIP
Preitner N 2014
Cirbp cold inducible RNA binding protein 12696 P60824 HITS-CLIP
Preitner N 2014
Cltc clathrin, heavy polypeptide (Hc) 67300 Q68FD5 HITS-CLIP
Preitner N 2014
Cnr1 cannabinoid receptor 1 (brain) 12801 P47746 HITS-CLIP
Preitner N 2014
COG4 component of oligomeric golgi complex 4 25839 Q9H9E3 Y2H
Bandyopadhyay S 2010
COG5 component of oligomeric golgi complex 5 10466 Q9UP83 Y2H
Bandyopadhyay S 2010
Cpe carboxypeptidase E 12876 Q00493 HITS-CLIP
Preitner N 2014
CREBBP CREB binding protein 1387 Q92793 Y2H
Bandyopadhyay S 2010
Crebzf CREB/ATF bZIP transcription factor 233490 Q91ZR3 HITS-CLIP
Preitner N 2014
Csde1 cold shock domain containing E1, RNA binding 229663 Q91W50 HITS-CLIP
Preitner N 2014
CSNK1A1 casein kinase 1, alpha 1 1452 P48729 Metabolic labeling with 32P
HITS-CLIP
Godin KS 2009
Csnk1a1 casein kinase 1, alpha 1 93687 Q8BK63 Metabolic labeling with 32P
HITS-CLIP
Preitner N 2014
CSNK1E casein kinase 1, epsilon 1454 P49674 IP/WB
HITS-CLIP
Rubinfeld B 2001
Csnk1e casein kinase 1, epsilon 27373 Q9JMK2 IP/WB
HITS-CLIP
Preitner N 2014
CSNK2A1 casein kinase 2, alpha 1 polypeptide 1457 P68400 IP/WB; GST; in vitro kinase assay
Homma MK 2002
CSNK2B casein kinase 2, beta polypeptide 1460 P67870 IP/WB; GST; in vitro kinase assay
Homma MK 2002
Cstf3 cleavage stimulation factor, 3' pre-RNA, subunit 3 228410 Q99LI7 HITS-CLIP
Preitner N 2014
CTBP1 C-terminal binding protein 1 1487 Q13363 GST; MS; IP/WB
Hamada F 2004
Ctdspl2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 329506 Q8BG15 HITS-CLIP
Preitner N 2014
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 1495 P35221 IP/WB; in vitro binding assay; Peptide mapping
Su LK 1993
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 1499 P35222 IP/WB; in vitro binding assay; Peptide mapping
HITS-CLIP
Su LK 1993
Ctnnb1 catenin (cadherin associated protein), beta 1 12387 Q02248 IP/WB; in vitro binding assay; Peptide mapping
HITS-CLIP
Preitner N 2014
Cxadr coxsackie virus and adenovirus receptor 13052 P97792 HITS-CLIP
Preitner N 2014
Cxcr4 chemokine (C-X-C motif) receptor 4 12767 P70658 HITS-CLIP
Preitner N 2014
Cyp51 cytochrome P450, family 51 13121 Q8K0C4 HITS-CLIP
Preitner N 2014
CYTH2 cytohesin 2 9266 Q99418 Y2H
Bandyopadhyay S 2010
Dcx doublecortin 13193 O88809 HITS-CLIP
Preitner N 2014
Ddx17 DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 67040 Q501J6 HITS-CLIP
Preitner N 2014
Ddx6 DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 13209 P54823 HITS-CLIP
Preitner N 2014
Dhx9 DEAH (Asp-Glu-Ala-His) box polypeptide 9 13211 O70133 HITS-CLIP
Preitner N 2014
DLG3 discs, large homolog 3 (Drosophila) 1741 Q92796 Y2H; GST
Makino K 1997
Dpysl2 dihydropyrimidinase-like 2 12934 O08553 HITS-CLIP
Preitner N 2014
DST dystonin 667 Q03001 Y2H
HITS-CLIP
Bandyopadhyay S 2010
Dst dystonin 13518 Q91ZU6 Y2H
HITS-CLIP
Preitner N 2014
Dtx3 deltex 3 homolog (Drosophila) 80904 Q80V91 HITS-CLIP
Preitner N 2014
Dync1li2 dynein, cytoplasmic 1 light intermediate chain 2 234663 Q6PDL0 HITS-CLIP
Preitner N 2014
Dynll2 dynein light chain LC8-type 2 68097 Q9D0M5 HITS-CLIP
Preitner N 2014
Eif4h eukaryotic translation initiation factor 4H 22384 Q9WUK2 HITS-CLIP
Preitner N 2014
Elavl2 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) 15569 Q60899 HITS-CLIP
Preitner N 2014
Elavl3 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C) 15571 Q60900 HITS-CLIP
Preitner N 2014
Elavl4 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D) 15572 Q61701 HITS-CLIP
Preitner N 2014
Enc1 ectodermal-neural cortex 1 13803 O35709 HITS-CLIP
Preitner N 2014
EPAS1 endothelial PAS domain protein 1 2034 Q99814 Y2H
Bandyopadhyay S 2010
Epha4 Eph receptor A4 13838 Q03137 HITS-CLIP
Preitner N 2014
ERBB2IP erbb2 interacting protein 55914 Q96RT1 Y2H
Bandyopadhyay S 2010
EXPH5 exophilin 5 23086 Q8NEV8 Y2H
Bandyopadhyay S 2010
Fabp7 fatty acid binding protein 7, brain 12140 P51880 HITS-CLIP
Preitner N 2014
Fam168b family with sequence similarity 168, member B 214469 G3UWF0 HITS-CLIP
Preitner N 2014
Fam171a2 family with sequence similarity 171, member A2 217219 A2A699 HITS-CLIP
Preitner N 2014
FBXO30 F-box protein 30 84085 Q8TB52 Y2H
Bandyopadhyay S 2010
FHOD1 formin homology 2 domain containing 1 29109 Q9Y613 Y2H
Bandyopadhyay S 2010
Fjx1 four jointed box 1 (Drosophila) 14221 Q8BQB4 HITS-CLIP
Preitner N 2014
FLNA filamin A, alpha 2316 P21333 Y2H
HITS-CLIP
Bandyopadhyay S 2010
Flna filamin, alpha 192176 Q8BTM8 Y2H
HITS-CLIP
Preitner N 2014
Fnbp1l formin binding protein 1-like 214459 Q8K012 HITS-CLIP
Preitner N 2014
Foxg1 forkhead box G1 15228 Q60987 HITS-CLIP
Preitner N 2014
Fubp1 far upstream element (FUSE) binding protein 1 51886 Q91WJ8 HITS-CLIP
Preitner N 2014
Fzd3 frizzled homolog 3 (Drosophila) 14365 Q61086 HITS-CLIP
Preitner N 2014
G2e3 G2/M-phase specific E3 ubiquitin ligase 217558 Q5RJY2 HITS-CLIP
Preitner N 2014
Gdi1 Rho GDP dissociation inhibitor (GDI) alpha 192662 Q99PT1 HITS-CLIP
Preitner N 2014
GIGYF2 GRB10 interacting GYF protein 2 26058 Q6Y7W6 Y2H
Bandyopadhyay S 2010
Gnb1 guanine nucleotide binding protein (G protein), beta 1 14688 P62874 HITS-CLIP
Preitner N 2014
GOLGA2 golgin A2 2801 Q08379 Y2H
Bandyopadhyay S 2010
Gpc2 "Secreted glypican-2" 71951 Q8BKV1 HITS-CLIP; EMSA
Preitner N 2014
Gpm6a glycoprotein m6a 234267 P35802 HITS-CLIP
Preitner N 2014
Gpm6b glycoprotein m6b 14758 P35803 HITS-CLIP
Preitner N 2014
Grb10 growth factor receptor bound protein 10 14783 Q60760 HITS-CLIP
Preitner N 2014
GSK3B glycogen synthase kinase 3 beta 2932 P49841 IP/WB
HITS-CLIP
Davies G 2001
Gsk3b glycogen synthase kinase 3 beta 56637 Q9WV60 IP/WB
HITS-CLIP
Preitner N 2014
H1f0 "Histone H1.0, N-terminally processed" 14958 P10922 HITS-CLIP
Preitner N 2014
H3f3b H3 histone, family 3B 15081 P84244 HITS-CLIP
Preitner N 2014
Hba-a1 P01942 HITS-CLIP
Preitner N 2014
Hba-a2 hemoglobin alpha, adult chain 1 15122 Q91VB8 HITS-CLIP
Preitner N 2014
Hba-x hemoglobin X, alpha-like embryonic chain in Hba complex 15126 P06467 HITS-CLIP
Preitner N 2014
Hbb-y hemoglobin Y, beta-like embryonic chain 15135 P02104 HITS-CLIP
Preitner N 2014
Hdac2 Histone deacetylase 2 15182 P70288 HITS-CLIP
Preitner N 2014
HGS hepatocyte growth factor-regulated tyrosine kinase substrate 9146 O14964 Y2H
Bandyopadhyay S 2010
Hipk1 homeodomain interacting protein kinase 1 15257 O88904 HITS-CLIP
Preitner N 2014
Hmgcr 3-hydroxy-3-methylglutaryl-Coenzyme A reductase 15357 Q01237 HITS-CLIP
Preitner N 2014
Hn1 "Hematological and neurological expressed 1 protein, N-terminally processed 15374 P97825 HITS-CLIP
Preitner N 2014
Hnrnpa0 Heterogeneous nuclear ribonucleoprotein A0 77134 Q9CX86 HITS-CLIP
Preitner N 2014
Hnrnpd heterogeneous nuclear ribonucleoprotein D 11991 Q60668 HITS-CLIP
Preitner N 2014
Hnrnpl heterogeneous nuclear ribonucleoprotein L 15388 Q8R081 HITS-CLIP
Preitner N 2014
HNRNPM heterogeneous nuclear ribonucleoprotein M 4670 P52272 Y2H
HITS-CLIP
Bandyopadhyay S 2010
Hnrnpm heterogeneous nuclear ribonucleoprotein M 76936 Q9D0E1 Y2H
HITS-CLIP
Preitner N 2014
Hnrnpul2 heterogeneous nuclear ribonucleoprotein U-like 2 68693 Q00PI9 HITS-CLIP
Preitner N 2014
Hsd17b12 hydroxysteroid (17-beta) dehydrogenase 12 56348 O70503 HITS-CLIP
Preitner N 2014
Hsp90aa1 heat shock protein 90, alpha (cytosolic), class A member 1 15519 P07901 HITS-CLIP
Preitner N 2014
Hspa4 Q61316 HITS-CLIP
Preitner N 2014
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 3309 Q2KHP4 Y2H
HITS-CLIP
Bandyopadhyay S 2010
Hspa5 heat shock protein 5 14828 P20029 Y2H
HITS-CLIP
Preitner N 2014
Id4 inhibitor of DNA binding 4 15904 P41139 HITS-CLIP
Preitner N 2014
Idh1 isocitrate dehydrogenase 1 (NADP+), soluble 15926 O88844 HITS-CLIP
Preitner N 2014
Igfbpl1 insulin-like growth factor binding protein-like 1 75426 Q80W15 HITS-CLIP
Preitner N 2014
Impad1 inositol monophosphatase domain containing 1 242291 Q80V26 HITS-CLIP
Preitner N 2014
ING5 inhibitor of growth family, member 5 84289 Q8WYH8 Y2H
Bandyopadhyay S 2010
IQGAP1 IQ motif containing GTPase activating protein 1 8826 P46940 IP/WB; in vitro binding assay
Watanabe T 2004
Ireb2 iron responsive element binding protein 2 64602 Q811J3 HITS-CLIP
Preitner N 2014
Irf2bp2 interferon regulatory factor 2 binding protein 2 270110 E9Q1P8 HITS-CLIP
Preitner N 2014
Islr2 immunoglobulin superfamily containing leucine-rich repeat 2 320563 Q5RKR3 HITS-CLIP
Preitner N 2014
Ivns1abp influenza virus NS1A binding protein 117198 Q920Q8 HITS-CLIP
Preitner N 2014
JUP junction plakoglobin 3728 P14923 GST; IP/WB
Shibata T 1994
KIAA1328 KIAA1328 57536 Q86T90 Y2H
Bandyopadhyay S 2010
KIAA1370 KIAA1370 56204 Q32MH5 Y2H
Bandyopadhyay S 2010
Kidins220 kinase D-interacting substrate 220 77480 E9Q9B7 HITS-CLIP
Preitner N 2014
Kif21a kinesin family member 21A 16564 Q9QXL2 HITS-CLIP
Preitner N 2014
KIF5B kinesin family member 5B 3799 P33176 Y2H
Bandyopadhyay S 2010
Kif5c kinesin family member 5C 16574 P28738 HITS-CLIP
Preitner N 2014
KIFAP3 kinesin-associated protein 3 22920 Q92845 in vitro binding assay; Y2H; IP/WB
Jimbo T 2002
Klhdc10 kelch domain containing 10 76788 Q6PAR0 HITS-CLIP
Preitner N 2014
Klhl9 kelch-like 9 242521 Q6ZPT1 HITS-CLIP
Preitner N 2014
Kmt2d Q6PDK2 HITS-CLIP
Preitner N 2014
Kpnb1 karyopherin (importin) beta 1 16211 P70168 HITS-CLIP
Preitner N 2014
KRT13 keratin 13 3860 P13646 Y2H
Bandyopadhyay S 2010
KRT14 keratin 14 3861 P02533 Y2H
Bandyopadhyay S 2010
KRT15 keratin 15 3866 P19012 Y2H
Bandyopadhyay S 2010
KRT17 keratin 17 3872 Q04695 Y2H
Bandyopadhyay S 2010
KRT19 keratin 19 3880 P08727 Y2H
Bandyopadhyay S 2010
KRT23 keratin 23 (histone deacetylase inducible) 25984 Q9C075 Y2H
Bandyopadhyay S 2010
KRT5 keratin 5 3852 P13647 Y2H
Bandyopadhyay S 2010
LAMA3 laminin, alpha 3 3909 Q16787 Y2H
Bandyopadhyay S 2010
LAMA4 laminin, alpha 4 3910 Q16363 Y2H
Bandyopadhyay S 2010
Laptm4a Q60961 HITS-CLIP
Preitner N 2014
Lars2 leucyl-tRNA synthetase, mitochondrial 102436 Q8VDC0 HITS-CLIP
Preitner N 2014
Leng8 leukocyte receptor cluster (LRC) member 8 232798 Q8CBY3 HITS-CLIP
Preitner N 2014
Lime1 Lck interacting transmembrane adaptor 1 72699 Q9EQR5 HITS-CLIP
Preitner N 2014
Lin7c lin-7 homolog C (C. elegans) 22343 A2ARI2 HITS-CLIP
Preitner N 2014
Lmnb1 lamin B1 16906 P14733 HITS-CLIP
Preitner N 2014
LPHN1 latrophilin 1 22859 O94910 Y2H
Bandyopadhyay S 2010
Lrrc58 leucine rich repeat containing 58 320184 Q3UGP9 HITS-CLIP
Preitner N 2014
Lrrn1 leucine rich repeat protein 1, neuronal 16979 Q61809 HITS-CLIP
Preitner N 2014
Luc7l3 LUC7-like 3 (S. cerevisiae) 67684 Q5SUF2 HITS-CLIP
Preitner N 2014
MACF1 microtubule-actin crosslinking factor 1 23499 Q9UPN3 Y2H
Bandyopadhyay S 2010
Magee1 melanoma antigen, family E, 1 107528 Q6PCZ4 HITS-CLIP
Preitner N 2014
Map1b microtubule-associated protein 1B 17755 P14873 HITS-CLIP
Preitner N 2014
MAPRE1 microtubule-associated protein, RP/EB family, member 1 22919 Q15691 GST
Askham JM 2002
Marcks myristoylated alanine rich protein kinase C substrate 17118 P26645 HITS-CLIP
Preitner N 2014
Marcksl1 MARCKS-like 1 17357 P28667 HITS-CLIP
Preitner N 2014
Maz MYC-associated zinc finger protein (purine-binding transcription factor) 17188 P56671 HITS-CLIP
Preitner N 2014
MBD5 methyl-CpG binding domain protein 5 55777 Q9P267 Y2H
Bandyopadhyay S 2010
MCM3AP minichromosome maintenance complex component 3 associated protein 8888 O60318 Y2H
Bandyopadhyay S 2010
Mest mesoderm specific transcript 17294 Q07646 HITS-CLIP
Preitner N 2014
Mex3d mex3 homolog D (C. elegans) 237400 E9PUA0 HITS-CLIP
Preitner N 2014
Midn midnolin 59090 Q3TPJ7 HITS-CLIP
Preitner N 2014
Mlec malectin 109154 Q6ZQI3 HITS-CLIP
Preitner N 2014
Mllt11 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11 56772 P97783 HITS-CLIP
Preitner N 2014
Mllt6 Q8VHB4 HITS-CLIP
Preitner N 2014
Mn1 meningioma 1 433938 D3YWE6 HITS-CLIP
Preitner N 2014
MUC1 mucin 1, cell surface associated 4582 P15941 IP/WB
Hattrup CL 2004
MYH10 myosin, heavy chain 10, non-muscle 4628 P35580 Y2H
Bandyopadhyay S 2010
MYH11 myosin, heavy chain 11, smooth muscle 4629 P35749 Y2H
Bandyopadhyay S 2010
MYO6 myosin VI 4646 Q9UM54 Y2H
Bandyopadhyay S 2010
Naa38 N(alpha)-acetyltransferase 38, NatC auxiliary subunit 78304 Q9D2U5 HITS-CLIP
Preitner N 2014
NAV1 neuron navigator 1 89796 Q8NEY1 Y2H
Bandyopadhyay S 2010
NAV2 neuron navigator 2 89797 Q8IVL1 Y2H
Bandyopadhyay S 2010
NAV3 neuron navigator 3 89795 Q8IVL0 Y2H
Bandyopadhyay S 2010
Ncan neurocan 13004 P55066 HITS-CLIP
Preitner N 2014
NCKAP5 NCK-associated protein 5 344148 O14513 Y2H
Bandyopadhyay S 2010
NCKAP5L NCK-associated protein 5-like 57701 Q9HCH0 Y2H
Bandyopadhyay S 2010
Ncoa6 nuclear receptor coactivator 6 56406 Q5XJV5 HITS-CLIP
Preitner N 2014
ND4 mitochondrially encoded NADH dehydrogenase 4 4538 P03905 Y2H
Bandyopadhyay S 2010
Ndn necdin 17984 P25233 HITS-CLIP
Preitner N 2014
NEB nebulin 4703 P20929 Y2H
Bandyopadhyay S 2010
Nedd4 neural precursor cell expressed, developmentally down-regulated 4 17999 P46935 HITS-CLIP
Preitner N 2014
Neto2 neuropilin (NRP) and tolloid (TLL)-like 2 74513 Q8BNJ6 HITS-CLIP
Preitner N 2014
Neurod6 neurogenic differentiation 6 11922 P48986 HITS-CLIP
Preitner N 2014
Nnat neuronatin 18111 Q61979 HITS-CLIP
Preitner N 2014
NOSTRIN nitric oxide synthase trafficker 115677 Q8IVI9 Y2H
Bandyopadhyay S 2010
Npepps aminopeptidase puromycin sensitive 19155 Q11011 HITS-CLIP
Preitner N 2014
Nptn neuroplastin 20320 P97300 HITS-CLIP
Preitner N 2014
Nr2f1 nuclear receptor subfamily 2, group F, member 1 13865 Q60632 HITS-CLIP
Preitner N 2014
Nrep neuronal regeneration related protein 27528 Q07475 HITS-CLIP
Preitner N 2014
Nsg2 neuron specific gene family member 2 18197 P47759 HITS-CLIP
Preitner N 2014
Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 98415 Q80XU3 HITS-CLIP
Preitner N 2014
Nudt3 nudix (nucleotide diphosphate linked moiety X)-type motif 3 56409 Q9JI46 HITS-CLIP
Preitner N 2014
Nufip2 nuclear fragile X mental retardation protein interacting protein 2 68564 Q5F2E7 HITS-CLIP
Preitner N 2014
NUP153 nucleoporin 153kDa 9972 P49790 Y2H
Bandyopadhyay S 2010
NUP214 nucleoporin 214kDa 8021 P35658 Y2H
Bandyopadhyay S 2010
NUP54 nucleoporin 54kDa 53371 Q7Z3B4 Y2H
Bandyopadhyay S 2010
NUP98 nucleoporin 98kDa 4928 P52948 Y2H
Bandyopadhyay S 2010
NUPL1 nucleoporin like 1 9818 Q9BVL2 Y2H
Bandyopadhyay S 2010
NUPL2 nucleoporin like 2 11097 O15504 Y2H
Bandyopadhyay S 2010
Ogt O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) 108155 Q8CGY8 HITS-CLIP
Preitner N 2014
Pafah1b1 platelet-activating factor acetylhydrolase, isoform 1b, subunit 1 18472 P63005 HITS-CLIP
Preitner N 2014
Pbrm1 Q8BSQ9 HITS-CLIP
Preitner N 2014
Pcbp1 poly(rC) binding protein 1 23983 P60335 HITS-CLIP
Preitner N 2014
Pcdhg* protocadherin gamma subfamily A, 4 93712 Q91XY4 HITS-CLIP
Preitner N 2014
Pdia6 protein disulfide isomerase associated 6 71853 Q922R8 HITS-CLIP
Preitner N 2014
Pfn2 profilin 2 18645 Q9JJV2 HITS-CLIP
Preitner N 2014
Pgrmc1 progesterone receptor membrane component 1 53328 O55022 HITS-CLIP
Preitner N 2014
Plekhj1 pleckstrin homology domain containing, family J member 1 78670 Q9D240 HITS-CLIP
Preitner N 2014
PNISR PNN-interacting serine/arginine-rich protein 25957 Q8TF01 Y2H
Bandyopadhyay S 2010
Polr2m polymerase (RNA) II (DNA directed) polypeptide M 28015 Q6P6I6 HITS-CLIP
Preitner N 2014
POM121 POM121 membrane glycoprotein 9883 Q96HA1 Y2H
Bandyopadhyay S 2010
POM121C POM121 membrane glycoprotein C 100101267 A8CG34 Y2H
Bandyopadhyay S 2010
Pou3f3 POU domain, class 3, transcription factor 3 18993 P31361 HITS-CLIP
Preitner N 2014
Ppm1b protein phosphatase 1B, magnesium dependent, beta isoform 19043 P36993 HITS-CLIP
Preitner N 2014
Ppp1cb protein phosphatase 1, catalytic subunit, beta isoform 19046 P62141 HITS-CLIP
Preitner N 2014
PPP1R13B protein phosphatase 1, regulatory (inhibitor) subunit 13B 23368 Q8WUF5 Y2H
Bandyopadhyay S 2010
PPP2CA protein phosphatase 2, catalytic subunit, alpha isoenzyme 5515 P67775 Metabolic labeling with 32P
HITS-CLIP
Ikeda S 2000
Ppp2ca protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform 19052 P63330 Metabolic labeling with 32P
HITS-CLIP
Preitner N 2014
Ppp6r1 protein phosphatase 6, regulatory subunit 1 243819 Q7TSI3 HITS-CLIP
Preitner N 2014
Prkar1a "cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally p 19084 Q9DBC7 HITS-CLIP
Preitner N 2014
Prpf4b PRP4 pre-mRNA processing factor 4 homolog B (yeast) 19134 Q61136 HITS-CLIP
Preitner N 2014
Prrc2b proline-rich coiled-coil 2B 227723 Q7TPM1 HITS-CLIP
Preitner N 2014
PSMD1 proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 5707 Q99460 Y2H
Bandyopadhyay S 2010
PTPN13 protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) 5783 O14603 Y2H; GST; in vitro binding assay; Surface plasmon resonance (SPR)
Erdmann KS 2000
Pum1 pumilio 1 (Drosophila) 80912 Q80U78 HITS-CLIP
Preitner N 2014
Qk quaking 19317 Q9QYS9 HITS-CLIP
Preitner N 2014
R3hdm4 R3H domain containing 4 109284 Q4VBF2 HITS-CLIP
Preitner N 2014
Rad23b RAD23b homolog (S. cerevisiae) 19359 P54728 HITS-CLIP; EMSA
Preitner N 2014
RANBP2 RAN binding protein 2 5903 P49792 Y2H
Bandyopadhyay S 2010
RANBP9 RAN binding protein 9 10048 Q96S59 Y2H
Bandyopadhyay S 2010
Rbbp4 retinoblastoma binding protein 4 19646 Q60972 HITS-CLIP
Preitner N 2014
Rbfox2 RNA binding protein, fox-1 homolog (C. elegans) 2 93686 Q8BP71 HITS-CLIP
Preitner N 2014
Rbm33 RNA binding motif protein 33 381626 Q9CXK9 HITS-CLIP
Preitner N 2014
RBM4B RNA binding motif protein 4B 83759 Q9BQ04 Y2H
Bandyopadhyay S 2010
Rc3h2 ring finger and CCCH-type zinc finger domains 2 319817 P0C090 HITS-CLIP
Preitner N 2014
Rcn2 reticulocalbin 2 26611 Q8BP92 HITS-CLIP
Preitner N 2014
Rgma repulsive guidance molecule family member A 244058 Q6PCX7 HITS-CLIP
Preitner N 2014
Rgmb RGM domain family, member B 68799 Q7TQ33 HITS-CLIP
Preitner N 2014
Rimklb ribosomal modification protein rimK-like family member B 108653 Q80WS1 HITS-CLIP
Preitner N 2014
Rnd3 Rho family GTPase 3 74194 P61588 HITS-CLIP
Preitner N 2014
Rnf145 ring finger protein 145 74315 Q5SWK7 HITS-CLIP
Preitner N 2014
Rnf2 ring finger protein 2 19821 Q9CQJ4 HITS-CLIP
Preitner N 2014
RP1 retinitis pigmentosa 1 (autosomal dominant) 6101 P56715 IP/WB
Renner C 1997
RPS27 ribosomal protein S27 6232 P42677 Y2H
Bandyopadhyay S 2010
Rps6kb1 ribosomal protein S6 kinase, 70kDa, polypeptide 1 72508 Q8BSK8 HITS-CLIP
Preitner N 2014
Rtn1 reticulon 1 104001 Q8K0T0 HITS-CLIP
Preitner N 2014
Rtn3 reticulon 3 20168 Q9ES97 HITS-CLIP
Preitner N 2014
Rtn4 reticulon 4 68585 Q99P72 HITS-CLIP
Preitner N 2014
Scd2 stearoyl-Coenzyme A desaturase 2 20250 P13011 HITS-CLIP
Preitner N 2014
Sec23a SEC23A (S. cerevisiae) 20334 Q01405 HITS-CLIP
Preitner N 2014
SEC31A SEC31 homolog A (S. cerevisiae) 22872 O94979 Y2H
Bandyopadhyay S 2010
Senp6 SUMO/sentrin specific peptidase 6 215351 Q6P7W0 HITS-CLIP
Preitner N 2014
Serinc1 serine incorporator 1 56442 Q9QZI8 HITS-CLIP
Preitner N 2014
SETDB1 SET domain, bifurcated 1 9869 Q15047 Y2H
Bandyopadhyay S 2010
SFN stratifin 2810 P31947 TAP; MudPIT
Benzinger A 2005
SIAH1 seven in absentia homolog 1 (Drosophila) 6477 Q8IUQ4 in vitro binding assay; IP/WB
Liu J 2001
Slc38a1 solute carrier family 38, member 1 105727 Q8K2P7 HITS-CLIP
Preitner N 2014
Slc38a2 solute carrier family 38, member 2 67760 Q8CFE6 HITS-CLIP
Preitner N 2014
SMC3 structural maintenance of chromosomes 3 9126 Q9UQE7 Y2H
Bandyopadhyay S 2010
Smg7 Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans) 226517 Q5RJH6 HITS-CLIP
Preitner N 2014
Snhg11 small nucleolar RNA host gene 11 319317 Q4G0K9 HITS-CLIP
Preitner N 2014
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 23020 O75643 Y2H
Bandyopadhyay S 2010
Sox11 SRY-box containing gene 11 20666 Q7M6Y2 HITS-CLIP
Preitner N 2014
Sox4 SRY-box containing gene 4 20677 Q06831 HITS-CLIP
Preitner N 2014
SPECC1L sperm antigen with calponin homology and coiled-coil domains 1-like 23384 Q69YQ0 Y2H
Bandyopadhyay S 2010
SPTBN1 spectrin, beta, non-erythrocytic 1 6711 Q01082 Y2H
HITS-CLIP
Bandyopadhyay S 2010
Sptbn1 spectrin beta 2 20742 Q3TTX2 Y2H
HITS-CLIP
Preitner N 2014
SPTBN2 spectrin, beta, non-erythrocytic 2 6712 O15020 Y2H
Bandyopadhyay S 2010
Srcin1 SRC kinase signaling inhibitor 1 56013 Q9QWI6 HITS-CLIP
Preitner N 2014
Srsf1 serine/arginine-rich splicing factor 1 110809 Q6PDM2 HITS-CLIP
Preitner N 2014
Srsf7 serine/arginine-rich splicing factor 7 225027 Q8BL97 HITS-CLIP
Preitner N 2014
Srsf9 serine/arginine-rich splicing factor 9 108014 Q9D0B0 HITS-CLIP
Preitner N 2014
Ssr3 signal sequence receptor, gamma 67437 Q9DCF9 HITS-CLIP
Preitner N 2014
Stxbp1 syntaxin binding protein 1 20910 O08599 HITS-CLIP
Preitner N 2014
Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein 56403 Q3TRV3 HITS-CLIP
Preitner N 2014
SYNE1 spectrin repeat containing, nuclear envelope 1 23345 Q8NF91 Y2H
Bandyopadhyay S 2010
Syt1 synaptotagmin I 20979 P46096 HITS-CLIP
Preitner N 2014
Syt11 synaptotagmin XI 229521 Q9R0N3 HITS-CLIP
Preitner N 2014
T2 Q06666 HITS-CLIP
Preitner N 2014
TAF1 TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa 6872 P21675 Y2H
Bandyopadhyay S 2010
Taok1 TAO kinase 1 216965 Q5F2E8 HITS-CLIP
Preitner N 2014
Tardbp TAR DNA binding protein 230908 Q8BLD4 HITS-CLIP
Preitner N 2014
Tbc1d16 TBC1 domain family, member 16 207592 Q6PFC0 HITS-CLIP
Preitner N 2014
Tbr1 T-box brain gene 1 21375 Q64336 HITS-CLIP
Preitner N 2014
Tcf4 transcription factor 4 21413 Q60722 HITS-CLIP
Preitner N 2014
TFAP2A transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) 7020 P05549 IP/WB; in vitro binding assay; GST
Li Q 2004
Tle3 transducin-like enhancer of split 3, homolog of Drosophila E(spl) 21887 Q08122 HITS-CLIP
Preitner N 2014
Tle4 transducin-like enhancer of split 4, homolog of Drosophila E(spl) 21888 Q62441 HITS-CLIP
Preitner N 2014
Tm9sf3 transmembrane 9 superfamily member 3 107358 Q9ET30 HITS-CLIP
Preitner N 2014
Tmed7 transmembrane emp24 protein transport domain containing 7 66676 D3YZZ5 HITS-CLIP
Preitner N 2014
Tmeff1 transmembrane protein with EGF-like and two follistatin-like domains 1 230157 Q6PFE7 HITS-CLIP
Preitner N 2014
Tmod2 tropomodulin 2 50876 Q9JKK7 HITS-CLIP
Preitner N 2014
Tmsb4x "Hematopoietic system regulatory peptide" 19241 P20065 HITS-CLIP
Preitner N 2014
Tmx1 thioredoxin-related transmembrane protein 1 72736 Q8VBT0 HITS-CLIP
Preitner N 2014
Tmx4 thioredoxin-related transmembrane protein 4 52837 Q8C0L0 HITS-CLIP
Preitner N 2014
Tnks2 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2 74493 Q3UES3 HITS-CLIP
Preitner N 2014
Tnrc6b trinucleotide repeat containing 6b 213988 Q8BKI2 HITS-CLIP
Preitner N 2014
Tomm70a translocase of outer mitochondrial membrane 70 homolog A (yeast) 28185 Q9CZW5 HITS-CLIP
Preitner N 2014
Top2b topoisomerase (DNA) II beta 21974 Q64511 HITS-CLIP
Preitner N 2014
TOP3B topoisomerase (DNA) III beta 8940 O95985 HITS-CLIP
Xu D 2013
TPR translocated promoter region (to activated MET oncogene) 7175 P12270 Y2H
HITS-CLIP
Bandyopadhyay S 2010
Tpr translocated promoter region, nuclear basket protein 108989 F6ZDS4 Y2H
HITS-CLIP
Preitner N 2014
TRIM21 tripartite motif-containing 21 6737 P19474 Y2H
Bandyopadhyay S 2010
Trp53inp1 transformation related protein 53 inducible nuclear protein 1 60599 Q9QXE4 HITS-CLIP
Preitner N 2014
Tsc22d1 TSC22 domain family, member 1 21807 P62500 HITS-CLIP
Preitner N 2014
Tspan3 tetraspanin 3 56434 Q545L1 HITS-CLIP
Preitner N 2014
Ttc14 tetratricopeptide repeat domain 14 67120 Q9CSP9 HITS-CLIP
Preitner N 2014
Tuba1a tubulin, alpha 1A 22142 P68369 HITS-CLIP
Preitner N 2014
Tubb2b tubulin, beta 2B class IIB 73710 Q9CWF2 HITS-CLIP; EMSA
Preitner N 2014
Tubb5 tubulin, beta 5 class I 22154 P99024 HITS-CLIP
Preitner N 2014
UBC ubiquitin C 7316 P63279 WB; in vitro ubiquitination assay; IP/WB
Choi J 2004
Ubqln2 ubiquilin 2 54609 Q9QZM0 HITS-CLIP
Preitner N 2014
Ubxn7 UBX domain protein 7 224111 Q6P5G6 HITS-CLIP
Preitner N 2014
Ugcg UDP-glucose ceramide glucosyltransferase 22234 O88693 HITS-CLIP
Preitner N 2014
Vash1 vasohibin 1 238328 Q8C1W1 HITS-CLIP
Preitner N 2014
Vcan Q62059 HITS-CLIP
Preitner N 2014
Wdr26 WD repeat domain 26 226757 Q8C6G8 HITS-CLIP
Preitner N 2014
Wsb1 WD repeat and SOCS box-containing 1 78889 O54927 HITS-CLIP
Preitner N 2014
XPO1 exportin 1 (CRM1 homolog, yeast) 7514 O14980 Affinity chromatography
Tickenbrock L 2002
Xpr1 xenotropic and polytropic retrovirus receptor 1 19775 Q9Z0U0 HITS-CLIP
Preitner N 2014
Ywhae tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 22627 P62259 HITS-CLIP
Preitner N 2014
Ywhag tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 22628 P61982 HITS-CLIP
Preitner N 2014
Ywhaz tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 22631 P63101 HITS-CLIP
Preitner N 2014
Zfhx3 Q61329 HITS-CLIP
Preitner N 2014
ZFP106 zinc finger protein 106 homolog (mouse) 64397 Q9H2Y7 Y2H
Bandyopadhyay S 2010
Zfp26 zinc finger protein 26 22688 P10076 HITS-CLIP
Preitner N 2014
Zfp516 zinc finger protein 516 329003 Q7TSH3 HITS-CLIP
Preitner N 2014
Zfp664 zinc finger protein 664 269704 Q4VA44 HITS-CLIP
Preitner N 2014
Zic1 zinc finger protein of the cerebellum 1 22771 P46684 HITS-CLIP
Preitner N 2014
FMR1 fragile X mental retardation 1 14265 P35922 HITS-CLIP
Darnell JC 2011
Rbfox1 RNA binding protein, fox-1 homolog (C. elegans) 1 268859 Q9JJ43 HITS-CLIP
Weyn-Vanhentenryck SM 2014
Dlgap1 discs, large (Drosophila) homolog-associated protein 1 65040 P97836 IP/WB
Satoh K 1997

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