| ABAT | 4-aminobutyrate aminotransferase | 16 | Rare Single Gene Mutation, Genetic Association | 2 | | 7 |
| ABCA10 | ATP-binding cassette, sub-family A (ABC1), member 10 | 17 | Rare Single Gene Mutation | 2 | | 2 |
| ABCA13 | ATP binding cassette subfamily A member 13 | 7 | Rare Single Gene Mutation, Functional | 2 | | 10 |
| ABCA7 | ATP-binding cassette, sub-family A (ABC1), member 7 | 19 | Rare Single Gene Mutation | 2 | | 5 |
| ACE | angiotensin I converting enzyme | 17 | Rare Single Gene Mutation, Genetic Association | 2 | | 5 |
| ACHE | Acetylcholinesterase (Yt blood group) | 7 | Rare Single Gene Mutation | 2 | | 7 |
| ACTN4 | actinin alpha 4 | 19 | Rare Single Gene Mutation | 2 | | 6 |
| ADA | adenosine deaminase | 20 | Rare Single Gene Mutation, Genetic Association | 2 | | 8 |
| ADCY3 | adenylate cyclase 3 | 2 | Rare Single Gene Mutation | 2 | | 3 |
| ADCY5 | Adenylate cyclase 5 | 3 | Rare Single Gene Mutation | 2 | | 9 |
| ADK | adenosine kinase | 10 | Rare Single Gene Mutation | 2 | | 2 |
| ADORA3 | Adenosine A3 receptor | 1 | Rare Single Gene Mutation, Functional | 2 | | 3 |
| ADSS2 | adenylosuccinate synthase 2 | 1 | Rare Single Gene Mutation | 2 | | 3 |
| AGAP1 | ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 | 2 | Rare Single Gene Mutation | 2 | | 9 |
| AGAP2 | ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 | 12 | Rare Single Gene Mutation | 2 | | 6 |
| AGBL4 | ATP/GTP binding protein-like 4 | 1 | Rare Single Gene Mutation | 2 | | 3 |
| AGMO | alkylglycerol monooxygenase | 7 | Rare Single Gene Mutation, Genetic Association | 2 | | 7 |
| AGO1 | argonaute 1, RISC catalytic component | 1 | Rare Single Gene Mutation | 2 | | 10 |
| AGO2 | argonaute RISC catalytic component 2 | 8 | Rare Single Gene Mutation, Syndromic | 2 | S | 2 |
| AGO3 | argonaute RISC catalytic component 3 | 1 | Rare Single Gene Mutation | 2 | | 6 |
| AGO4 | argonaute RISC catalytic component 4 | 1 | Rare Single Gene Mutation | 2 | | 4 |
| AGTR2 | angiotensin II receptor, type 2 | X | Rare Single Gene Mutation | 2 | | 5 |
| AHNAK | AHNAKnucleoprotein | 11 | Rare Single Gene Mutation | 2 | | 6 |
| AKAP9 | A kinase (PRKA) anchor protein 9 | 7 | Rare Single Gene Mutation | 2 | | 6 |
| AMPD1 | Adenosine monophosphate deaminase 1 | 1 | Rare Single Gene Mutation, Genetic Association | 2 | | 4 |
| AMT | Aminomethyltransferase | 3 | Rare Single Gene Mutation | 2 | | 1 |
| ANKRD17 | ankyrin repeat domain 17 | 4 | Rare Single Gene Mutation, Syndromic | 2 | S | 6 |
| ANKS1B | ankyrin repeat and sterile alpha motif domain containing 1B | 12 | Rare Single Gene Mutation, Syndromic | 2 | S | 4 |
| ANXA1 | Annexin A1 | 9 | Rare Single Gene Mutation | 2 | | 2 |
| APBA2 | amyloid beta (A4) precursor protein-binding, family A, member 2 | 15 | Rare Single Gene Mutation | 2 | | 8 |
| APBB1 | amyloid beta precursor protein binding family B member 1 | 11 | Rare Single Gene Mutation, Functional | 2 | | 4 |
| APH1A | APH1A gamma secretase subunit | 1 | Rare Single Gene Mutation | 2 | | 3 |
| ARHGAP11B | Rho GTPase activating protein 11B | 15 | Rare Single Gene Mutation | 2 | | 3 |
| ARHGAP32 | Rho GTPase activating protein 32 | 11 | Rare Single Gene Mutation, Functional | 2 | | 9 |
| ARHGAP5 | Rho GTPase activating protein 5 | 14 | Rare Single Gene Mutation | 2 | | 6 |
| ARHGEF10 | Rho guanine nucleotide exchange factor 10 | 8 | Rare Single Gene Mutation, Functional | 2 | | 6 |
| ARID2 | AT-rich interaction domain 2 | 12 | Rare Single Gene Mutation, Syndromic | 2 | S | 12 |
| ARNT2 | aryl-hydrocarbon receptor nuclear translocator 2 | 15 | Rare Single Gene Mutation, Syndromic, Genetic Association, Functional | 2 | | 15 |
| ADORA2A | adenosine A2a receptor | 22 | Genetic Association | 2 | | 7 |
| ADRB2 | adrenergic, beta-2-, receptor, surface | 5 | Genetic Association | 2 | | 10 |
| AR | androgen receptor | X | Genetic Association | 2 | | 6 |
| ASAP2 | ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 | 2 | Rare Single Gene Mutation | 2 | | 4 |
| ASB14 | ankyrin repeat and SOCS box containing 14 | 3 | Rare Single Gene Mutation | 2 | | 4 |
| ASMT | acetylserotonin O-methyltransferase | X,Y | Rare Single Gene Mutation, Genetic Association | 2 | | 10 |
| ASPM | abnormal spindle microtubule assembly | 1 | Rare Single Gene Mutation, Syndromic, Functional | 2 | | 10 |
| ASTN2 | astrotactin 2 | 9 | Rare Single Gene Mutation, Genetic Association | 2 | | 19 |
| ATP10A | Probable phospholipid-transporting ATPase VA | 15 | Rare Single Gene Mutation, Genetic Association, Functional | 2 | | 9 |
| ATP1A1 | ATPase Na+/K+ transporting subunit alpha 1 | 1 | Rare Single Gene Mutation, Syndromic | 2 | S | 8 |
| ATP1A3 | ATPase Na+/K+ transporting subunit alpha 3 | 19 | Rare Single Gene Mutation, Syndromic, Functional | 2 | S | 21 |
| ATP2B2 | ATPase, Ca++ transporting, plasma membrane 2 | 3 | Rare Single Gene Mutation, Genetic Association | 2 | | 12 |
| ATP6V0A2 | ATPase H+ transporting V0 subunit a2 | 12 | Rare Single Gene Mutation | 2 | | 4 |
| AVPR1A | arginine vasopressin receptor 1A | 12 | Rare Single Gene Mutation, Genetic Association | 2 | | 24 |
| AZGP1 | alpha-2-glycoprotein 1, zinc-binding | 7 | Rare Single Gene Mutation | 2 | | 3 |
| BBS4 | Bardet-Biedl syndrome 4 | 15 | Rare Single Gene Mutation, Syndromic | 2 | | 5 |
| BCAS1 | breast carcinoma amplified sequence 1 | 20 | Rare Single Gene Mutation | 2 | | 5 |
| BICRA | BRD4 interacting chromatin remodeling complex associated protein | 19 | Rare Single Gene Mutation, Syndromic | 2 | S | 2 |
| BIRC6 | Baculoviral IAP repeat containing 6 | 2 | Rare Single Gene Mutation | 2 | | 12 |
| BRCA2 | breast cancer 2, early onset | 13 | Rare Single Gene Mutation | 2 | | 6 |
| BRD4 | bromodomain containing 4 | 19 | Rare Single Gene Mutation, Syndromic, Functional | 2 | | 9 |
| BST1 | bone marrow stromal cell antigen 1 | 4 | Genetic Association, Functional | 2 | | 5 |
| BTAF1 | RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae) | 10 | Rare Single Gene Mutation | 2 | | 8 |
| BTRC | beta-transducin repeat containing E3 ubiquitin protein ligase | 10 | Rare Single Gene Mutation | 2 | | 4 |
| C15orf62 | chromosome 15 open reading frame 62 | 15 | Rare Single Gene Mutation | 2 | | 2 |
| C4B | complement component 4B | 6 | Rare Single Gene Mutation, Genetic Association, Functional | 2 | | 6 |
| CA6 | carbonic anhydrase VI | 1 | Rare Single Gene Mutation | 2 | | 7 |
| CACNA1B | calcium voltage-gated channel subunit alpha1 B | 9 | Rare Single Gene Mutation, Syndromic, Genetic Association | 2 | | 13 |
| AVPR1B | arginine vasopressin receptor 1B | 1 | Genetic Association, Functional | 2 | | 8 |
| BICDL1 | BICD family like cargo adaptor 1 | 12 | Genetic Association | 2 | | 2 |
| CACNA1D | calcium channel, voltage-dependent, L type, alpha 1D | 3 | Rare Single Gene Mutation, Syndromic, Genetic Association, Functional | 2 | | 26 |
| CACNA1F | calcium channel, voltage-dependent, alpha 1F | X | Rare Single Gene Mutation, Genetic Association | 2 | | 9 |
| CACNA1G | calcium channel, voltage-dependent, T type, alpha 1G subunit | 17 | Rare Single Gene Mutation, Syndromic, Genetic Association | 2 | | 24 |
| CACNA1H | calcium channel, voltage-dependent, alpha 1H subunit | 16 | Rare Single Gene Mutation | 2 | | 32 |
| CACNA1I | Calcium channel, voltage-dependent, T type, alpha 1I subunit | 22 | Rare Single Gene Mutation, Genetic Association | 2 | | 10 |
| CACNA2D1 | calcium voltage-gated channel auxiliary subunit alpha2delta 1 | 7 | Rare Single Gene Mutation, Syndromic | 2 | | 8 |
| CACNB2 | Calcium channel, voltage-dependent, beta 2 subunit | 10 | Rare Single Gene Mutation, Genetic Association, Functional | 2 | | 11 |
| CADM1 | cell adhesion molecule 1 | 11 | Rare Single Gene Mutation | 2 | | 10 |
| CADM2 | Cell adhesion molecule 2 | 3 | Rare Single Gene Mutation, Genetic Association | 2 | | 6 |
| CADPS | calcium dependent secretion activator | 3 | Rare Single Gene Mutation, Genetic Association | 2 | | 5 |
| CADPS2 | Ca2+-dependent activator protein for secretion 2 | 7 | Rare Single Gene Mutation, Functional | 2 | | 12 |
| CAMK2A | calcium/calmodulin dependent protein kinase II alpha | 5 | Rare Single Gene Mutation, Syndromic, Genetic Association, Functional | 2 | S | 11 |
| CAMK4 | calcium/calmodulin dependent protein kinase IV | 5 | Rare Single Gene Mutation, Genetic Association | 2 | | 5 |
| CAPN12 | Calpain 12 | 19 | Rare Single Gene Mutation | 2 | | 6 |
| CARD11 | caspase recruitment domain family member 11 | 7 | Rare Single Gene Mutation | 2 | | 2 |
| CASKIN1 | CASK interacting protein 1 | 16 | Rare Single Gene Mutation, Functional | 2 | | 7 |
| CC2D1A | Coiled-coil and C2 domain containing 1A | 19 | Rare Single Gene Mutation, Functional | 2 | | 15 |
| CCDC88C | Coiled-coil domain containing 88C | 14 | Rare Single Gene Mutation | 2 | | 8 |
| CCDC91 | coiled-coil domain containing 91 | 12 | Rare Single Gene Mutation | 2 | | 5 |
| CCIN | calicin | 9 | Rare Single Gene Mutation | 2 | | 2 |
| CCNG1 | cyclin G1 | 5 | Rare Single Gene Mutation | 2 | | 1 |
| CCSER1 | coiled-coil serine rich protein 1 | 4 | Rare Single Gene Mutation | 2 | | 4 |
| CCT4 | Chaperonin containing TCP1, subunit 4 (delta) | 2 | Rare Single Gene Mutation | 2 | | 3 |
| CD276 | CD276molecule | 15 | Rare Single Gene Mutation | 2 | | 3 |
| CD38 | CD38 molecule | 4 | Rare Single Gene Mutation, Genetic Association, Functional | 2 | | 10 |
| CD99L2 | CD99 molecule like 2 | X | Genetic Association | 2 | | 1 |
| CDC42BPB | CDC42 binding protein kinase beta (DMPK-like) | 14 | Rare Single Gene Mutation, Syndromic | 2 | | 11 |
| CDH10 | cadherin 10, type 2 (T2-cadherin) | 5 | Rare Single Gene Mutation, Genetic Association | 2 | | 11 |
| CDH11 | cadherin 11 | 16 | Rare Single Gene Mutation, Syndromic, Functional | 2 | | 8 |
| CDH13 | cadherin 13 | 16 | Rare Single Gene Mutation | 2 | | 6 |
| CDH22 | cadherin-like 22 | 20 | Genetic Association | 2 | | 4 |
| CDH8 | cadherin 8, type 2 | 16 | Rare Single Gene Mutation | 2 | | 11 |
| CDH9 | cadherin 9, type 2 (T1-cadherin) | 5 | Rare Single Gene Mutation, Genetic Association | 2 | | 7 |
| CDK16 | cyclin dependent kinase 16 | X | Rare Single Gene Mutation | 2 | | 3 |
| CECR2 | CECR2, histone acetyl-lysine reader | 22 | Rare Single Gene Mutation | 2 | | 3 |
| CELF2 | CUGBP Elav-like family member 2 | 10 | Rare Single Gene Mutation, Syndromic | 2 | S | 4 |
| CELF6 | CUGBP, Elav-like family member 6 | 15 | Rare Single Gene Mutation, Genetic Association | 2 | | 5 |
| CEP135 | centrosomal protein 135 | 4 | Rare Single Gene Mutation, Syndromic | 2 | | 6 |
| CEP290 | Centrosomal protein 290kDa | 12 | Rare Single Gene Mutation, Syndromic | 2 | S | 11 |
| CEP41 | testis specific, 14 | 7 | Rare Single Gene Mutation, Syndromic | 2 | | 6 |
| CGNL1 | Cingulin-like 1 | 15 | Rare Single Gene Mutation | 2 | | 6 |
| CHD1 | chromodomain helicase DNA binding protein 1 | 5 | Rare Single Gene Mutation, Syndromic | 2 | S | 7 |
| CHMP1A | charged multivesicular body protein 1A | 16 | Rare Single Gene Mutation, Syndromic | 2 | | 5 |
| CHRM3 | cholinergic receptor muscarinic 3 | 1 | Rare Single Gene Mutation, Genetic Association | 2 | | 6 |
| CHRNA7 | cholinergic receptor, nicotinic, alpha 7 | 15 | Rare Single Gene Mutation | 2 | | 16 |
| CHRNB3 | cholinergic receptor nicotinic beta 3 subunit | 8 | Rare Single Gene Mutation | 2 | | 3 |
| CIB2 | Calcium and integrin binding family member 2 | 15 | Rare Single Gene Mutation | 2 | | 2 |
| CLASP1 | cytoplasmic linker associated protein 1 | 2 | Rare Single Gene Mutation | 2 | | 4 |
| CLCN4 | chloride voltage-gated channel 4 | X | Rare Single Gene Mutation, Syndromic | 2 | S | 10 |
| CLN8 | Ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation) | 8 | Rare Single Gene Mutation, Syndromic | 2 | | 5 |
| CLTCL1 | clathrin, heavy chain-like 1 | 22 | Rare Single Gene Mutation | 2 | | 7 |
| CMIP | c-Maf inducing protein | 16 | Rare Single Gene Mutation, Genetic Association | 2 | | 6 |
| CMPK2 | cytidine/uridine monophosphate kinase 2 | 2 | Rare Single Gene Mutation | 2 | | 4 |
| CNGB3 | cyclic nucleotide gated channel beta 3 | 8 | Rare Single Gene Mutation | 2 | | 5 |
| CNKSR2 | connector enhancer of kinase suppressor of Ras 2 | X | Rare Single Gene Mutation, Syndromic, Functional | 2 | S | 12 |
| CNOT1 | CCR4-NOT transcription complex subunit 1 | 16 | Rare Single Gene Mutation, Syndromic | 2 | S | 8 |
| CNR1 | cannabinoid receptor 1 (brain) | 6 | Rare Single Gene Mutation, Genetic Association | 2 | | 8 |
| CNTN3 | contactin 3 | 3 | Rare Single Gene Mutation | 2 | | 6 |
| CNTN4 | contactin 4 | 3 | Rare Single Gene Mutation, Syndromic, Genetic Association, Functional | 2 | | 26 |
| CNTN5 | Contactin 5 | 11 | Rare Single Gene Mutation, Genetic Association | 2 | | 11 |
| CNTN6 | Contactin 6 | 3 | Rare Single Gene Mutation, Genetic Association | 2 | | 16 |
| CNTNAP2 | contactin associated protein-like 2 | 7 | Rare Single Gene Mutation, Syndromic, Genetic Association, Functional | 2 | S | 84 |
| CNTNAP3 | contactin associated protein-like 3 | 9 | Rare Single Gene Mutation, Functional | 2 | | 7 |
| CNTNAP4 | Contactin associated protein-like 4 | 16 | Rare Single Gene Mutation, Functional | 2 | | 14 |
| CNTNAP5 | contactin associated protein-like 5 | 2 | Rare Single Gene Mutation, Genetic Association | 2 | | 14 |
| COL28A1 | collagen type XXVIII alpha 1 chain | 7 | Rare Single Gene Mutation | 2 | | 4 |
| CPT2 | carnitine palmitoyltransferase 2 | 1 | Rare Single Gene Mutation | 2 | | 3 |
| CPZ | carboxypeptidase Z | 4 | Rare Single Gene Mutation | 2 | | 4 |
| CPEB4 | cytoplasmic polyadenylation element binding protein 4 | 5 | Functional | 2 | | 1 |
| CSMD1 | CUB and Sushi multiple domains 1 | 8 | Rare Single Gene Mutation, Genetic Association | 2 | | 16 |
| CSNK1E | casein kinase 1 epsilon | 22 | Rare Single Gene Mutation, Functional | 2 | | 7 |
| CTNNA3 | catenin (cadherin-associated protein), alpha 3 | 10 | Rare Single Gene Mutation, Genetic Association | 2 | | 17 |
| CTNND2 | Catenin (cadherin-associated protein), delta 2 | 5 | Rare Single Gene Mutation, Syndromic, Functional | 2 | | 11 |
| CTTNBP2 | cortactin binding protein 2 | 7 | Rare Single Gene Mutation, Syndromic, Functional | 2 | | 14 |
| CUL7 | Cullin 7 | 6 | Rare Single Gene Mutation | 2 | | 8 |
| CUX1 | cut like homeobox 1 | 7 | Rare Single Gene Mutation, Functional | 2 | | 11 |
| CUX2 | cut like homeobox 2 | 12 | Rare Single Gene Mutation, Syndromic | 2 | S | 12 |
| CX3CR1 | Chemokine (C-X3-C motif) receptor 1 | 3 | Rare Single Gene Mutation, Functional | 2 | | 3 |
| CYFIP1 | cytoplasmic FMR1 interacting protein 1 | 15 | Rare Single Gene Mutation, Genetic Association, Functional | 2 | | 19 |
| CYLC2 | cylicin, basic protein of sperm head cytoskeleton 2 | 9 | Rare Single Gene Mutation | 2 | | 3 |
| DAGLA | diacylglycerol lipase alpha | 11 | Rare Single Gene Mutation, Functional | 2 | | 7 |
| DAPP1 | Dual adaptor of phosphotyrosine and 3-phosphoinositides | 4 | Rare Single Gene Mutation | 2 | | 3 |
| DDC | dopa decarboxylase | 7 | Rare Single Gene Mutation, Genetic Association | 2 | | 5 |
| DDHD2 | DDHD domain containing 2 | 8 | Rare Single Gene Mutation, Genetic Association, Functional | 2 | | 5 |
| DDX53 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 | X | Rare Single Gene Mutation | 2 | | 4 |
| DENR | density-regulated protein | 12 | Rare Single Gene Mutation, Functional | 2 | | 4 |
| DIP2C | disco interacting protein 2 homolog C | 10 | Rare Single Gene Mutation | 2 | | 5 |
| DIPK2A | divergent protein kinase domain 2A | 3 | Rare Single Gene Mutation | 2 | | 3 |
| DISC1 | disrupted in schizophrenia 1 | 1 | Rare Single Gene Mutation, Syndromic, Genetic Association | 2 | | 35 |
| DIXDC1 | DIX domain containing 1 | 11 | Rare Single Gene Mutation, Functional | 2 | | 5 |
| DLG1 | discs large MAGUK scaffold protein 1 | 3 | Rare Single Gene Mutation | 2 | | 6 |
| DLG2 | discs large MAGUK scaffold protein 2 | 11 | Rare Single Gene Mutation, Functional | 2 | | 11 |
| DLGAP1 | DLG associated protein 1 | 18 | Rare Single Gene Mutation, Functional | 2 | | 12 |
| DLGAP2 | discs, large (Drosophila) homolog-associated protein 2 | 8 | Rare Single Gene Mutation | 2 | | 17 |
| DLGAP3 | DLG associated protein 3 | 1 | Rare Single Gene Mutation, Genetic Association, Functional | 2 | | 11 |
| DLL1 | delta like canonical Notch ligand 1 | 6 | Rare Single Gene Mutation, Syndromic | 2 | S | 4 |
| DLX3 | distal-less homeobox 3 | 17 | Rare Single Gene Mutation | 2 | | 4 |
| DLX6 | distal-less homeobox 6 | 7 | Rare Single Gene Mutation | 2 | | 10 |
| DMWD | DM1 locus, WD repeat containing | 19 | Rare Single Gene Mutation | 2 | | 3 |
| DMXL2 | Dmx-like 2 | 15 | Rare Single Gene Mutation | 2 | | 8 |
| DNAH10 | Dynein, axonemal, heavy chain 10 | 12 | Rare Single Gene Mutation | 2 | | 9 |
| DNAH17 | dynein axonemal heavy chain 17 | 17 | Rare Single Gene Mutation | 2 | | 8 |
| DNAH3 | dynein axonemal heavy chain 3 | 16 | Rare Single Gene Mutation | 2 | | 7 |
| DNER | Delta/notch-like EGF repeat containing | 2 | Rare Single Gene Mutation, Genetic Association | 2 | | 3 |
| DOCK1 | Dedicator of cytokinesis 1 | 10 | Rare Single Gene Mutation | 2 | | 3 |
| DOCK4 | Dedicator of cytokinesis 4 | 7 | Rare Single Gene Mutation, Genetic Association, Functional | 2 | | 11 |
| DOCK8 | dedicator of cytokinesis 8 | 9 | Rare Single Gene Mutation | 2 | | 12 |
| DPP10 | Dipeptidyl-peptidase 10 | 2 | Rare Single Gene Mutation | 2 | | 12 |
| DPP3 | dipeptidyl peptidase 3 | 11 | Rare Single Gene Mutation | 2 | | 4 |
| DPP4 | Dipeptidyl-peptidase 4 | 2 | Rare Single Gene Mutation, Genetic Association | 2 | | 6 |
| DPP6 | dipeptidyl-peptidase 6 | 7 | Rare Single Gene Mutation, Genetic Association, Functional | 2 | | 27 |
| DPYD | dihydropyrimidine dehydrogenase | 1 | Rare Single Gene Mutation, Syndromic, Genetic Association | 2 | | 14 |
| DPYSL3 | dihydropyrimidinase like 3 | 5 | Rare Single Gene Mutation | 2 | | 3 |
| DRD2 | Dopamine receptor D2 | 11 | Rare Single Gene Mutation, Genetic Association | 2 | | 7 |
| DRD3 | dopamine receptor D3 | 3 | Rare Single Gene Mutation, Genetic Association | 2 | | 9 |
| DST | Dystonin | 6 | Rare Single Gene Mutation | 2 | | 10 |
| DUSP15 | dual specificity phosphatase 15 | 20 | Rare Single Gene Mutation, Genetic Association | 2 | | 6 |
| DVL3 | Dishevelled segment polarity protein 3 | 3 | Rare Single Gene Mutation, Functional | 2 | | 5 |
| DYDC1 | DPY30 domain containing 1 | 10 | Rare Single Gene Mutation | 2 | | 2 |
| DYDC2 | DPY30 domain containing 2 | 10 | | 2 | | 1 |
| CYP11B1 | cytochrome P450, family 11, subfamily B, polypeptide 1 | 8 | Syndromic | 2 | | 4 |
| DCC | DCCnetrin 1 receptor | 18 | Genetic Association | 2 | | 3 |
| DLX2 | distal-less homeobox 2 | 2 | Genetic Association | 2 | | 11 |
| DRD1 | Dopamine receptor D1 | 5 | Genetic Association, Functional | 2 | | 4 |
| ECPAS | Ecm29 proteasome adaptor and scaffold | 9 | Rare Single Gene Mutation, Functional | 2 | | 4 |
| EFR3A | EFR3 homolog A (S. cerevisiae) | 8 | Rare Single Gene Mutation | 2 | | 7 |
| EGR3 | early growth response 3 | 8 | Rare Single Gene Mutation | 2 | | 3 |
| EIF4E | eukaryotic translation initiation factor 4E | 4 | Rare Single Gene Mutation, Genetic Association | 2 | | 13 |
| ELAVL2 | ELAV like neuron-specific RNA binding protein 2 | 9 | Rare Single Gene Mutation, Genetic Association, Functional | 2 | | 7 |
| ELOVL2 | ELOVL fatty acid elongase 2 | 6 | Genetic Association | 2 | | 1 |
| ELP2 | elongator acetyltransferase complex subunit 2 | 18 | Syndromic | 2 | S | 6 |
| ELP4 | Elongator acetyltransferase complex subunit 4 | 11 | Rare Single Gene Mutation, Genetic Association | 2 | | 7 |
| EMSY | EMSY, BRCA2 interacting transcriptional repressor | 11 | Rare Single Gene Mutation, Functional | 2 | | 5 |
| EN2 | engrailed homolog 2 | 7 | Rare Single Gene Mutation, Genetic Association, Functional | 2 | | 25 |
| EP400 | E1A binding protein p400 | 12 | Rare Single Gene Mutation | 2 | | 8 |
| EPC2 | Enhancer of polycomb homolog 2 (Drosophila) | 2 | Rare Single Gene Mutation | 2 | | 6 |
| EPHA1 | EPH receptor A1 | 7 | Rare Single Gene Mutation | 2 | | 7 |
| EPHB2 | EPH receptor B2 | 1 | Rare Single Gene Mutation | 2 | | 8 |
| EPPK1 | epiplakin 1 | 8 | Rare Single Gene Mutation | 2 | | 7 |
| ERBIN | erbb2 interacting protein | 5 | Rare Single Gene Mutation | 2 | | 8 |
| ERMN | ermin | 2 | Rare Single Gene Mutation | 2 | | 1 |
| ESR2 | estrogen receptor 2 (ER beta) | 14 | Rare Single Gene Mutation, Syndromic, Genetic Association | 2 | | 9 |
| ESRRB | estrogen-related receptor beta | 14 | Rare Single Gene Mutation, Genetic Association | 2 | | 9 |
| ETFB | Electron-transfer-flavoprotein, beta polypeptide | 19 | Rare Single Gene Mutation | 2 | | 5 |
| EXOC3 | exocyst complex component 3 | 5 | Rare Single Gene Mutation | 2 | | 3 |
| EXOC5 | exocyst complex component 5 | 14 | Rare Single Gene Mutation | 2 | | 2 |
| EXOC6 | exocyst complex component 6 | 10 | Rare Single Gene Mutation | 2 | | 3 |
| EXOC6B | exocyst complex component 6B | 2 | Rare Single Gene Mutation | 2 | | 5 |
| EXT1 | Exostosin 1 | 8 | Rare Single Gene Mutation, Genetic Association | 2 | | 7 |
| FABP5 | fatty acid binding protein 5 (psoriasis-associated) | 8 | Rare Single Gene Mutation, Functional | 2 | | 8 |
| FAM47A | family with sequence similarity 47 member A | X | Rare Single Gene Mutation | 2 | | 1 |
| FAM98C | family with sequence similarity 98 member C | 19 | Rare Single Gene Mutation | 2 | | 2 |
| FAN1 | FANCD2/FANCI-associated nuclease 1 | 15 | Rare Single Gene Mutation, Genetic Association, Functional | 2 | | 3 |
| FAT1 | FAT atypical cadherin 1 | 4 | Rare Single Gene Mutation, Functional | 2 | | 11 |
| FBN1 | Fibrillin 1 | 15 | Rare Single Gene Mutation | 2 | | 13 |
| FBXO11 | F-box protein 11 | 2 | Rare Single Gene Mutation, Syndromic | 2 | S | 10 |
| FBXO33 | F-box protein 33 | 14 | Rare Single Gene Mutation, Genetic Association | 2 | | 4 |
| FBXO40 | F-box protein 40 | 3 | Rare Single Gene Mutation, Genetic Association | 2 | | 5 |
| FCRL6 | Fc receptor like 6 | 1 | Rare Single Gene Mutation | 2 | | 4 |
| FEZF2 | FEZ family zinc finger 2 | 3 | Rare Single Gene Mutation, Genetic Association | 2 | | 9 |
| FGA | Fibrinogen alpha chain | 4 | Rare Single Gene Mutation, Genetic Association | 2 | | 4 |
| FHIT | fragile histidine triad gene | 3 | Rare Single Gene Mutation, Genetic Association | 2 | | 12 |
| FRG1 | FSHD region gene 1 | 4 | Rare Single Gene Mutation | 2 | | 2 |
| FRK | fyn-related kinase | 6 | Rare Single Gene Mutation, Genetic Association | 2 | | 3 |
| GABBR2 | gamma-aminobutyric acid type B receptor subunit 2 | 9 | Rare Single Gene Mutation, Syndromic, Functional | 2 | S | 14 |
| GABRA4 | gamma-aminobutyric acid (GABA) A receptor, alpha 4 | 4 | Rare Single Gene Mutation, Genetic Association, Functional | 2 | | 9 |
| GABRG3 | gamma-aminobutyric acid type A receptor gamma3 subunit | 15 | Rare Single Gene Mutation, Genetic Association | 2 | | 11 |
| GALNT10 | polypeptide N-acetylgalactosaminyltransferase 10 | 5 | Rare Single Gene Mutation, Genetic Association | 2 | | 7 |
| GALNT13 | polypeptide N-acetylgalactosaminyltransferase 13 | 2 | Rare Single Gene Mutation | 2 | | 4 |
| GALNT14 | polypeptide N-acetylgalactosaminyltransferase 14 | 2 | Rare Single Gene Mutation, Genetic Association | 2 | | 7 |
| GALNT8 | polypeptide N-acetylgalactosaminyltransferase 8 | 12 | Rare Single Gene Mutation | 2 | | 2 |
| GBE1 | 1,4-alpha-glucan branching enzyme 1 | 3 | Rare Single Gene Mutation | 2 | | 4 |
| GDA | guanine deaminase | 9 | Rare Single Gene Mutation, Genetic Association | 2 | | 3 |
| GGNBP2 | gametogenetin binding protein 2 | 17 | Rare Single Gene Mutation | 2 | | 3 |
| GLIS1 | GLIS family zinc finger 1 | 1 | Rare Single Gene Mutation, Genetic Association | 2 | | 3 |
| GLO1 | glyoxalase I | 6 | Rare Single Gene Mutation, Genetic Association | 2 | | 10 |
| GLRA2 | glycine receptor, alpha 2 | X | Rare Single Gene Mutation, Functional | 2 | | 17 |
| GNAS | GNAS complex locus | 20 | Rare Single Gene Mutation | 2 | | 9 |
| GNB1L | guanine nucleotide binding protein (G protein), beta polypeptide 1-like | 22 | Rare Single Gene Mutation, Genetic Association | 2 | | 3 |
| GPC4 | glypican 4 | X | Rare Single Gene Mutation | 2 | | 2 |
| GPC6 | glypican 6 | 13 | Rare Single Gene Mutation, Genetic Association | 2 | | 8 |
| GPD2 | glycerol-3-phosphate dehydrogenase 2 | 2 | Rare Single Gene Mutation, Genetic Association | 2 | | 4 |
| GPHN | Gephyrin | 14 | Rare Single Gene Mutation | 2 | | 10 |
| GPR37 | G protein-coupled receptor 37 | 7 | Rare Single Gene Mutation | 2 | | 3 |
| GPR85 | G protein-coupled receptor 85 | 7 | Rare Single Gene Mutation, Genetic Association | 2 | | 5 |
| GRIA1 | glutamate ionotropic receptor AMPA type subunit 1 | 5 | Rare Single Gene Mutation, Syndromic | 2 | | 11 |
| GRID1 | Glutamate receptor, ionotropic, delta 1 | 10 | Rare Single Gene Mutation, Genetic Association | 2 | | 7 |
| GRID2 | glutamate receptor, ionotropic, delta 2 | 4 | Rare Single Gene Mutation, Syndromic, Genetic Association | 2 | | 11 |
| GRID2IP | Grid2 interacting protein | 7 | Rare Single Gene Mutation | 2 | | 5 |
| GRIK2 | glutamate ionotropic receptor kainate type subunit 2 | 6 | Rare Single Gene Mutation, Genetic Association | 2 | | 22 |
| GRIK3 | glutamate ionotropic receptor kainate type subunit 3 | 1 | Rare Single Gene Mutation, Genetic Association | 2 | | 7 |
| GRIK4 | Glutamate receptor, ionotropic, kainate 4 | 11 | Rare Single Gene Mutation, Functional | 2 | | 5 |
| GRIK5 | Glutamate receptor, ionotropic, kainate 5 | 19 | Rare Single Gene Mutation | 2 | | 10 |
| ERG | ERG, ETS transcription factor | 21 | Genetic Association | 2 | | 1 |
| FGFR1 | fibroblast growth factor receptor 1 | 8 | Genetic Association | 2 | | 1 |
| G3BP2 | G3BP stress granule assembly factor 2 | 4 | Rare Single Gene Mutation | 2 | | 6 |
| GAS2 | Growth arrest-specific 2 | 11 | Genetic Association | 2 | | 1 |
| GPX1 | glutathione peroxidase 1 | 3 | Genetic Association | 2 | | 5 |
| GRIP1 | glutamate receptor interacting protein 1 | 12 | Rare Single Gene Mutation | 2 | | 14 |
| GRK4 | G protein-coupled receptor kinase 4 | 4 | Rare Single Gene Mutation, Functional | 2 | | 6 |
| GRM5 | glutamate metabotropic receptor 5 | 11 | Rare Single Gene Mutation, Genetic Association, Functional | 2 | | 10 |
| GRM7 | Glutamate receptor, metabotropic 7 | 3 | Rare Single Gene Mutation, Genetic Association, Functional | 2 | | 17 |
| GTF2I | general transcription factor IIi | 7 | Rare Single Gene Mutation, Genetic Association | 2 | | 6 |
| GUCY1A2 | guanylate cyclase 1 soluble subunit alpha 2 | 11 | Rare Single Gene Mutation, Genetic Association | 2 | | 3 |
| H2BC11 | H2B clustered histone 11 | 6 | Rare Single Gene Mutation | 2 | | 3 |
| HDAC4 | histone deacetylase 4 | 2 | Rare Single Gene Mutation, Syndromic, Genetic Association | 2 | S | 17 |
| HECW2 | HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 | 2 | Rare Single Gene Mutation, Syndromic | 2 | | 16 |
| HERC1 | HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 | 15 | Rare Single Gene Mutation, Syndromic, Functional | 2 | S | 12 |
| HIVEP3 | human immunodeficiency virus type I enhancer binding protein 3 | 1 | Rare Single Gene Mutation, Genetic Association | 2 | | 8 |
| HLA-DPB1 | major histocompatibility complex, class II, DP beta 1 | 6 | Rare Single Gene Mutation, Genetic Association | 2 | | 2 |
| HNRNPD | heterogeneous nuclear ribonucleoprotein D | 4 | Rare Single Gene Mutation, Syndromic | 2 | S | 5 |
| HNRNPF | heterogeneous nuclear ribonucleoprotein F | 10 | Rare Single Gene Mutation | 2 | | 4 |
| HNRNPK | heterogeneous nuclear ribonucleoprotein K | 9 | Rare Single Gene Mutation, Syndromic | 2 | S | 11 |
| HNRNPR | heterogeneous nuclear ribonucleoprotein R | 1 | Rare Single Gene Mutation, Syndromic | 2 | S | 6 |
| HNRNPUL2 | heterogeneous nuclear ribonucleoprotein U like 2 | 11 | Rare Single Gene Mutation, Syndromic | 2 | S | 4 |
| HOMER1 | Homer homolog 1 (Drosophila) | 5 | Rare Single Gene Mutation, Functional | 2 | | 6 |
| GSTM1 | glutathione S-transferase M1 | 1 | Genetic Association | 2 | | 3 |
| HLA-A | major histocompatibility complex, class I, A | 6 | Genetic Association | 2 | | 10 |
| HLA-B | Major histocompatibility complex, class I, B | 6 | Genetic Association | 2 | | 5 |
| HLA-DRB1 | major histocompatibility complex, class II, DR beta 1 | 6 | Genetic Association | 2 | | 11 |
| HLA-G | major histocompatibility complex, class I, G | 6 | Genetic Association | 2 | | 4 |
| HMGN1 | high mobility group nucleosome binding domain 1 | 21 | Genetic Association | 2 | | 1 |
| HS3ST5 | heparan sulfate (glucosamine) 3-O-sulfotransferase 5 | 6 | Genetic Association | 2 | | 7 |
| HSD11B1 | hydroxysteroid (11-beta) dehydrogenase 1 | 1 | Rare Single Gene Mutation, Syndromic | 2 | | 9 |
| HTR1B | 5-hydroxytryptamine (serotonin) receptor 1B | 6 | Rare Single Gene Mutation, Genetic Association | 2 | | 6 |
| HTR3A | 5-hydroxytryptamine (serotonin) receptor 3A | 11 | Rare Single Gene Mutation, Genetic Association, Functional | 2 | | 8 |
| HTR3C | 5-hydroxytryptamine (serotonin) receptor 3, family member C | 3 | Rare Single Gene Mutation, Genetic Association | 2 | | 7 |
| HYDIN | HYDIN, axonemal central pair apparatus protein | 16 | Rare Single Gene Mutation, Genetic Association | 2 | | 4 |
| ICA1 | islet cell autoantigen 1 | 7 | Rare Single Gene Mutation | 2 | | 10 |
| IL1R2 | interleukin 1 receptor, type II | 2 | Rare Single Gene Mutation | 2 | | 7 |
| IL1RAPL1 | interleukin 1 receptor accessory protein-like 1 | X | Rare Single Gene Mutation | 2 | | 25 |
| IL1RAPL2 | interleukin 1 receptor accessory protein-like 2 | X | Rare Single Gene Mutation, Genetic Association | 2 | | 2 |
| ILF2 | Interleukin enhancer binding factor 2 | 1 | Rare Single Gene Mutation | 2 | | 6 |
| IMMP2L | IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) | 7 | Rare Single Gene Mutation, Genetic Association, Functional | 2 | | 16 |
| INPP1 | inositol polyphosphate-1-phosphatase | 2 | Rare Single Gene Mutation, Genetic Association | 2 | | 4 |
| INTS6 | Integrator complex subunit 6 | 13 | Rare Single Gene Mutation | 2 | | 5 |
| IQGAP3 | IQ motif containing GTPase activating protein 3 | 1 | Rare Single Gene Mutation | 2 | | 5 |
| ITGB3 | integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) | 17 | Rare Single Gene Mutation, Genetic Association, Functional | 2 | | 20 |
| ITPR1 | inositol 1,4,5-trisphosphate receptor type 1 | 3 | Rare Single Gene Mutation | 2 | | 14 |
| ITSN1 | intersectin 1 | 21 | Rare Single Gene Mutation, Syndromic | 2 | | 7 |
| JARID2 | jumonji and AT-rich interaction domain containing 2 | 6 | Rare Single Gene Mutation, Syndromic, Genetic Association | 2 | | 17 |
| JMJD1C | jumonji domain containing 1C | 10 | Rare Single Gene Mutation | 2 | | 10 |
| KANK1 | KN motif and ankyrin repeat domains 1 | 9 | Rare Single Gene Mutation | 2 | | 12 |
| KAT2B | K(lysine) acetyltransferase 2B | 3 | Rare Single Gene Mutation, Functional | 2 | | 8 |
| KAT6A | K(lysine) acetyltransferase 6A | 8 | Rare Single Gene Mutation, Syndromic, Functional | 2 | S | 25 |
| KATNAL1 | katanin catalytic subunit A1 like 1 | 13 | Rare Single Gene Mutation, Functional | 2 | | 3 |
| KCNC1 | potassium voltage-gated channel subfamily C member 1 | 11 | Rare Single Gene Mutation, Functional | 2 | | 7 |
| KCND2 | potassium voltage-gated channel subfamily D member 2 | 7 | Rare Single Gene Mutation, Genetic Association | 2 | | 8 |
| KCND3 | potassium voltage-gated channel subfamily D member 3 | 1 | Rare Single Gene Mutation, Syndromic, Genetic Association | 2 | | 13 |
| KCNJ10 | potassium voltage-gated channel subfamily J member 10 | 1 | Rare Single Gene Mutation, Syndromic, Genetic Association | 2 | | 12 |
| KCNJ15 | potassium voltage-gated channel subfamily J member 15 | 21 | Rare Single Gene Mutation | 2 | | 3 |
| KCNK7 | potassium two pore domain channel subfamily K member 7 | 11 | Rare Single Gene Mutation | 2 | | 2 |
| KCNMA1 | potassium large conductance calcium-activated channel, subfamily M, alpha member 1 | 10 | Rare Single Gene Mutation, Syndromic | 2 | | 29 |
| KCNQ2 | potassium voltage-gated channel subfamily Q member 2 | 20 | Rare Single Gene Mutation, Syndromic, Genetic Association, Functional | 2 | | 43 |
| KCNS3 | potassium voltage-gated channel modifier subfamily S member 3 | 2 | Rare Single Gene Mutation | 2 | | 5 |
| KCTD13 | Potassium channel tetramerisation domain containing 13 | 16 | Rare Single Gene Mutation, Functional | 2 | | 8 |
| KDM1B | lysine demethylase 1B | 6 | Rare Single Gene Mutation | 2 | | 3 |
| KDM4B | lysine demethylase 4B | 19 | Rare Single Gene Mutation, Syndromic, Functional | 2 | | 6 |
| KDM4C | lysine demethylase 4C | 9 | Rare Single Gene Mutation | 2 | | 4 |
| KDM5A | lysine demethylase 5A | 12 | Rare Single Gene Mutation | 2 | | 3 |
| KDM6A | lysine demethylase 6A | X | Rare Single Gene Mutation, Syndromic | 2 | | 11 |
| KHDRBS2 | KH domain containing, RNA binding, signal transduction associated 2 | 6 | Rare Single Gene Mutation | 2 | | 4 |
| KIAA1586 | KIAA1586 | 6 | Rare Single Gene Mutation | 2 | | 5 |
| KIF13B | Kinesin family member 13B | 8 | Rare Single Gene Mutation | 2 | | 4 |
| KIF14 | kinesin family member 14 | 1 | Rare Single Gene Mutation, Syndromic | 2 | | 6 |
| KIF1A | kinesin family member 1A | 2 | Rare Single Gene Mutation, Syndromic | 2 | S | 11 |
| KIF5C | Kinesin family member 5C | 2 | Rare Single Gene Mutation, Syndromic, Functional | 2 | S | 12 |
| KIRREL3 | Kin of IRRE like 3 (Drosophila) | 11 | Rare Single Gene Mutation | 2 | | 18 |
| KLF16 | Kruppel like factor 16 | 19 | Rare Single Gene Mutation | 2 | | 1 |
| KRR1 | KRR1, small subunit (SSU) processome component, homolog (yeast) | 12 | Rare Single Gene Mutation, Genetic Association | 2 | | 2 |
| KRT26 | keratin 26 | 17 | Rare Single Gene Mutation | 2 | | 3 |
| LAMA1 | Laminin, alpha 1 | 18 | Rare Single Gene Mutation, Genetic Association | 2 | | 10 |
| LAMB1 | laminin, beta 1 | 7 | Rare Single Gene Mutation, Genetic Association | 2 | | 8 |
| LEMD3 | LEM domain containing 3 | 12 | Rare Single Gene Mutation | 2 | | 3 |
| LEO1 | LEO1 homolog, Paf1/RNA polymerase II complex component | 15 | Rare Single Gene Mutation | 2 | | 4 |
| LEP | Leptin | 7 | Rare Single Gene Mutation | 2 | | 1 |
| LILRB2 | leukocyte immunoglobulin like receptor B2 | 19 | Rare Single Gene Mutation | 2 | | 3 |
| LIN7B | lin-7 homolog B, crumbs cell polarity complex component | 19 | Rare Single Gene Mutation | 2 | | 3 |
| LMX1B | LIM homeobox transcription factor 1 beta | 9 | Genetic Association | 2 | | 1 |
| LRBA | LPS-responsive vesicle trafficking, beach and anchor containing | 4 | Rare Single Gene Mutation | 2 | | 8 |
| LRFN2 | leucine rich repeat and fibronectin type III domain containing 2 | 6 | Rare Single Gene Mutation, Genetic Association, Functional | 2 | | 5 |
| LRFN5 | leucine rich repeat and fibronectin type III domain containing 5 | 14 | Rare Single Gene Mutation, Genetic Association, Functional | 2 | | 7 |
| LRP1 | LDL receptor related protein 1 | 12 | Rare Single Gene Mutation | 2 | | 7 |
| LRP2 | LDL receptor related protein 2 | 2 | Rare Single Gene Mutation, Syndromic, Genetic Association | 2 | | 18 |
| LRRC1 | leucine rich repeat containing 1 | 6 | Rare Single Gene Mutation, Genetic Association | 2 | | 6 |
| LRRC4 | leucine rich repeat containing 4 | 7 | Rare Single Gene Mutation, Functional | 2 | | 5 |
| LZTS2 | leucine zipper, putative tumor suppressor 2 | 10 | Genetic Association | 2 | | 4 |
| MACROD2 | MACRO domain containing 2 | 20 | Rare Single Gene Mutation, Genetic Association | 2 | | 22 |
| MAOA | monoamine oxidase A | X | Rare Single Gene Mutation, Syndromic, Genetic Association, Functional | 2 | | 18 |
| MAOB | monoamine oxidase B | X | Rare Single Gene Mutation, Syndromic, Genetic Association, Functional | 2 | | 6 |
| MAP4K4 | mitogen-activated protein kinase kinase kinase kinase 4 | 2 | Rare Single Gene Mutation, Syndromic | 2 | | 2 |
| MAPK3 | mitogen-activated protein kinase 3 | 16 | Rare Single Gene Mutation, Functional | 2 | | 6 |
| MAPT-AS1 | MAPT antisense RNA 1 | 17 | Genetic Association | 2 | | 1 |
| MARK1 | microtubule affinity regulating kinase 1 | 1 | Rare Single Gene Mutation, Genetic Association | 2 | | 11 |
| MARK2 | microtubule affinity regulating kinase 2 | 11 | Rare Single Gene Mutation | 2 | | 4 |
| MBD1 | methyl-CpG binding domain protein 1 | 18 | Rare Single Gene Mutation | 2 | | 8 |
| MBD3 | methyl-CpG binding domain protein 3 | 19 | Rare Single Gene Mutation | 2 | | 4 |
| MBD4 | methyl-CpG binding domain protein 4 | 3 | Rare Single Gene Mutation | 2 | | 7 |
| MBD6 | Methyl-CpG binding domain protein 6 | 12 | Rare Single Gene Mutation | 2 | | 3 |
| MCM4 | minichromosome maintenance complex component 4 | 8 | Rare Single Gene Mutation | 2 | | 3 |
| MCM6 | minichromosome maintenance complex component 6 | 2 | Rare Single Gene Mutation | 2 | | 3 |
| MCPH1 | microcephalin 1 | 8 | Rare Single Gene Mutation | 2 | | 18 |
| MDGA2 | MAM domain containing glycosylphosphatidylinositol anchor 2 | 14 | Rare Single Gene Mutation, Genetic Association | 2 | | 9 |
| MED12L | mediator complex subunit 12L | 3 | Rare Single Gene Mutation, Syndromic | 2 | S | 5 |
| MED23 | mediator complex subunit 23 | 6 | Rare Single Gene Mutation | 2 | | 2 |
| MEGF10 | multiple EGF like domains 10 | 5 | Rare Single Gene Mutation, Genetic Association | 2 | | 8 |
| MEGF11 | multiple EGF like domains 11 | 15 | Rare Single Gene Mutation | 2 | | 6 |
| MEMO1 | mediator of cell motility 1 | 2 | Rare Single Gene Mutation, Functional | 2 | | 2 |
| MET | met proto-oncogene (hepatocyte growth factor receptor) | 7 | Rare Single Gene Mutation, Genetic Association, Functional | 2 | | 40 |
| METTL26 | methyltransferase like 26 | 16 | Rare Single Gene Mutation | 2 | | 2 |
| MFRP | Membrane frizzled-related protein | 11 | Rare Single Gene Mutation | 2 | | 7 |
| MIB1 | Mindbomb E3 ubiquitin protein ligase 1 | 18 | Rare Single Gene Mutation | 2 | | 9 |
| MIR137 | microRNA 137 | 1 | Rare Single Gene Mutation, Syndromic, Genetic Association, Functional | 2 | | 10 |
| MLANA | melan-A | 9 | Rare Single Gene Mutation | 2 | | 3 |
| MRTFB | myocardin related transcription factor B | 16 | Rare Single Gene Mutation, Genetic Association | 2 | | 11 |
| MSANTD2 | Myb/SANT DNA binding domain containing 2 | 11 | Rare Single Gene Mutation | 2 | | 2 |
| MSR1 | macrophage scavenger receptor 1 | 8 | Rare Single Gene Mutation | 2 | | 5 |
| MTF1 | metal-regulatory transcription factor 1 | 1 | Rare Single Gene Mutation, Syndromic, Genetic Association | 2 | | 6 |
| MTHFR | methylenetetrahydrofolate reductase (NAD(P)H) | 1 | Rare Single Gene Mutation, Syndromic, Genetic Association | 2 | | 20 |
| MUC12 | mucin 12, cell surface associated | 7 | Rare Single Gene Mutation | 2 | | 3 |
| MUC4 | mucin 4, cell surface associated | 3 | Rare Single Gene Mutation | 2 | | 8 |
| MYH10 | myosin heavy chain 10 | 17 | Rare Single Gene Mutation | 2 | | 6 |
| MYH4 | Myosin, heavy chain 4, skeletal muscle | 17 | Rare Single Gene Mutation | 2 | | 6 |
| MYH9 | myosin heavy chain 9 | 22 | Rare Single Gene Mutation | 2 | | 7 |
| MYO16 | myosin XVI | 13 | Rare Single Gene Mutation, Genetic Association | 2 | | 9 |
| MYO1E | myosin IE | 15 | Rare Single Gene Mutation | 2 | | 6 |
| MYO5A | myosin VA | 15 | Rare Single Gene Mutation, Genetic Association | 2 | | 6 |
| MYO5C | myosin VC | 15 | Rare Single Gene Mutation | 2 | | 4 |
| MYO9B | Myosin IXB | 19 | Rare Single Gene Mutation | 2 | | 5 |
| NAALADL2 | N-acetylated alpha-linked acidic dipeptidase-like 2 | 3 | Rare Single Gene Mutation, Genetic Association | 2 | | 3 |
| NAV2 | neuron navigator 2 | 11 | Rare Single Gene Mutation, Syndromic | 2 | | 12 |
| NAV3 | neuron navigator 3 | 12 | Rare Single Gene Mutation | 2 | | 2 |
| NCKAP5 | NCK-associated protein 5 | 2 | Rare Single Gene Mutation | 2 | | 3 |
| MNT | MAX network transcriptional repressor | 17 | Genetic Association | 2 | | 1 |
| NCOR1 | nuclear receptor corepressor 1 | 17 | Rare Single Gene Mutation, Functional | 2 | | 9 |
| NDUFA5 | NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa | 7 | Genetic Association | 2 | | 3 |
| NEGR1 | neuronal growth regulator 1 | 1 | Rare Single Gene Mutation, Genetic Association, Functional | 2 | | 6 |
| NEO1 | Neogenin 1 | 15 | Rare Single Gene Mutation | 2 | | 2 |
| MSNP1AS | Moesinpseudogene 1, antisense | 5 | Genetic Association, Functional | 2 | | 13 |
| NFE2L3 | nuclear factor, erythroid 2 like 3 | 7 | Rare Single Gene Mutation | 2 | | 4 |
| NFIA | nuclear factor I/A | 1 | Rare Single Gene Mutation | 2 | | 15 |
| NFIB | nuclear factor I B | 9 | Rare Single Gene Mutation, Syndromic | 2 | S | 5 |
| NINL | Ninein-like | 20 | Rare Single Gene Mutation | 2 | | 8 |
| NIPA1 | non imprinted in Prader-Willi/Angelman syndrome 1 | 15 | Rare Single Gene Mutation | 2 | | 6 |
| NIPA2 | non imprinted in Prader-Willi/Angelman syndrome 2 | 15 | Rare Single Gene Mutation | 2 | | 3 |
| NLGN1 | neuroligin 1 | 3 | Rare Single Gene Mutation, Genetic Association | 2 | | 20 |
| NLGN4Y | neuroligin 4, Y-linked | Y | Rare Single Gene Mutation, Genetic Association, Functional | 2 | | 6 |
| NR1D1 | nuclear receptor subfamily 1 group D member 1 | 17 | Rare Single Gene Mutation | 2 | | 4 |
| NR2F1 | nuclear receptor subfamily 2 group F member 1 | 5 | Rare Single Gene Mutation, Syndromic, Functional | 2 | S | 22 |
| NRCAM | neuronal cell adhesion molecule | 7 | Rare Single Gene Mutation, Genetic Association | 2 | | 6 |
| NRP2 | neuropilin 2 | 2 | Rare Single Gene Mutation, Genetic Association | 2 | | 10 |
| NSD2 | nuclear receptor binding SET domain protein 2 | 4 | Rare Single Gene Mutation, Syndromic | 2 | S | 12 |
| NSMCE3 | NSE3 homolog, SMC5-SMC6 complex component | 15 | Rare Single Gene Mutation, Functional | 2 | | 4 |
| NTNG1 | netrin G1 | 1 | Rare Single Gene Mutation, Syndromic, Genetic Association | 2 | S | 8 |
| NTRK1 | neurotrophic tyrosine kinase, receptor, type 1 | 1 | Rare Single Gene Mutation, Syndromic | 2 | | 9 |
| NPAS2 | neuronal PAS domain protein 2 | 2 | Genetic Association | 2 | | 4 |
| NTRK3 | neurotrophic tyrosine kinase, receptor, type 3 | 15 | Rare Single Gene Mutation, Syndromic, Genetic Association | 2 | | 15 |
| NUAK1 | NUAK family, SNF1-like kinase, 1 | 12 | Rare Single Gene Mutation, Functional | 2 | | 6 |
| NUDCD2 | NudC domain containing 2 | 5 | Rare Single Gene Mutation | 2 | | 4 |
| NUP133 | nucleoporin 133kDa | 1 | Rare Single Gene Mutation | 2 | | 5 |
| NXPH1 | neurexophilin 1 | 7 | Rare Single Gene Mutation | 2 | | 6 |
| ODF3L2 | outer dense fiber of sperm tails 3-like 2 | 19 | Rare Single Gene Mutation | 2 | | 2 |
| OFD1 | OFD1, centriole and centriolar satellite protein | X | Rare Single Gene Mutation | 2 | | 4 |
| OPHN1 | oligophrenin 1 | X | Rare Single Gene Mutation, Syndromic | 2 | | 16 |
| OR1C1 | olfactory receptor, family 1, subfamily C, member 1 | 1 | Rare Single Gene Mutation | 2 | | 4 |
| OR2M4 | Olfactory receptor, family 2, subfamily M, member 4 | 1 | Genetic Association | 2 | | 1 |
| OR2T10 | olfactory receptor family 2 subfamily T member 10 | 1 | Rare Single Gene Mutation | 2 | | 3 |
| OR52M1 | Olfactory receptor, family 52, subfamily M, member 1 | 11 | Rare Single Gene Mutation | 2 | | 3 |
| OTUD7A | OTU deubiquitinase 7A | 15 | Rare Single Gene Mutation, Functional | 2 | | 6 |
| OTX1 | orthodenticle homeobox 1 | 2 | Genetic Association | 2 | | 3 |
| OXT | oxytocin/neurophysin I prepropeptide | 20 | Rare Single Gene Mutation, Genetic Association | 2 | | 5 |
| OXTR | oxytocin receptor | 3 | Rare Single Gene Mutation, Genetic Association, Functional | 2 | | 50 |
| P2RX5 | Purinergic receptor P2X, ligand gated ion channel, 5 | 17 | Rare Single Gene Mutation | 2 | | 4 |
| P4HA2 | Prolyl 4-hydroxylase, alpha polypeptide II | 5 | Rare Single Gene Mutation | 2 | | 4 |
| PAFAH1B2 | platelet activating factor acetylhydrolase 1b catalytic subunit 2 | 11 | Rare Single Gene Mutation | 2 | | 4 |
| PAK2 | p21 (RAC1) activated kinase 2 | 3 | Rare Single Gene Mutation, Syndromic | 2 | | 5 |
| PAPOLG | poly(A) polymerase gamma | 2 | Rare Single Gene Mutation | 2 | | 5 |
| PARD3B | Par-3 partitioning defective 3 homolog B (C. elegans) | 2 | Rare Single Gene Mutation, Genetic Association | 2 | | 9 |
| PATJ | PATJ, crumbs cell polarity complex component | 1 | Rare Single Gene Mutation, Genetic Association | 2 | | 5 |
| PBX1 | PBX homeobox 1 | 1 | Rare Single Gene Mutation | 2 | | 6 |
| PCDH10 | protocadherin 10 | 4 | Rare Single Gene Mutation, Functional | 2 | | 11 |
| PCDH11X | protocadherin 11 X-linked | X | Rare Single Gene Mutation | 2 | | 3 |
| PCDH15 | protocadherin related 15 | 10 | Rare Single Gene Mutation, Syndromic, Genetic Association | 2 | | 10 |
| PCDH9 | protocadherin 9 | 13 | Rare Single Gene Mutation, Genetic Association, Functional | 2 | | 10 |
| PCDHA1 | Protocadherin alpha 1 | 5 | Rare Single Gene Mutation, Syndromic, Genetic Association | 2 | | 4 |
| PCDHA10 | Protocadherin alpha 10 | 5 | Rare Single Gene Mutation, Genetic Association | 2 | | 5 |
| PCDHA11 | Protocadherin alpha 11 | 5 | Rare Single Gene Mutation, Genetic Association | 2 | | 6 |
| PCDHA12 | Protocadherin alpha 12 | 5 | Rare Single Gene Mutation, Genetic Association | 2 | | 4 |
| PCDHA13 | Protocadherin alpha 13 | 5 | Rare Single Gene Mutation, Genetic Association | 2 | | 5 |
| PCDHA2 | Protocadherin alpha 2 | 5 | Rare Single Gene Mutation, Genetic Association | 2 | | 5 |
| PCDHA3 | Protocadherin alpha 3 | 5 | Rare Single Gene Mutation, Genetic Association | 2 | | 4 |
| PCDHA4 | Protocadherin alpha 4 | 5 | Rare Single Gene Mutation, Genetic Association | 2 | | 5 |
| PCDHA5 | Protocadherin alpha 5 | 5 | Rare Single Gene Mutation, Genetic Association | 2 | | 5 |
| PCDHA6 | Protocadherin alpha 6 | 5 | Rare Single Gene Mutation, Genetic Association | 2 | | 4 |
| PCDHA7 | Protocadherin alpha 7 | 5 | Rare Single Gene Mutation, Genetic Association | 2 | | 7 |
| PCDHA8 | Protocadherin alpha 8 | 5 | Rare Single Gene Mutation, Genetic Association | 2 | | 5 |
| PCDHA9 | Protocadherin alpha 9 | 5 | Rare Single Gene Mutation, Genetic Association | 2 | | 4 |
| PCDHAC1 | Protocadherin alpha subfamily C, 1 | 5 | Rare Single Gene Mutation, Genetic Association | 2 | | 3 |
| PCDHAC2 | Protocadherin alpha subfamily C, 2 | 5 | Rare Single Gene Mutation, Genetic Association | 2 | | 4 |
| PCM1 | pericentriolar material 1 | 8 | Rare Single Gene Mutation | 2 | | 5 |
| PDCD1 | programmed cell death 1 | 2 | Rare Single Gene Mutation | 2 | | 4 |
| PDE1C | phosphodiesterase 1C | 7 | Rare Single Gene Mutation, Genetic Association | 2 | | 3 |
| PDK2 | pyruvate dehydrogenase kinase 2 | 17 | Rare Single Gene Mutation | 2 | | 5 |
| PER1 | period homolog 1 (Drosophila) | 17 | Rare Single Gene Mutation, Genetic Association | 2 | | 8 |
| PER2 | period circadian clock 2 | 2 | Rare Single Gene Mutation | 2 | | 7 |
| PEX7 | peroxisomal biogenesis factor 7 | 6 | Rare Single Gene Mutation, Genetic Association | 2 | | 5 |
| PHF7 | PHD finger protein 7 | 3 | Rare Single Gene Mutation | 2 | | 3 |
| PHRF1 | PHD and ring finger domains 1 | 11 | Rare Single Gene Mutation | 2 | | 5 |
| PITX1 | paired-like homeodomain 1 | 5 | Rare Single Gene Mutation, Genetic Association | 2 | | 6 |
| PLAUR | Plasminogen activator, urokinase receptor | 19 | Rare Single Gene Mutation, Genetic Association | 2 | | 3 |
| PLCB1 | phospholipase C, beta 1 (phosphoinositide-specific) | 20 | Rare Single Gene Mutation | 2 | | 8 |
| PLCD4 | phospholipase C delta 4 | 2 | Rare Single Gene Mutation | 2 | | 5 |
| PLN | phospholamban | 6 | Rare Single Gene Mutation | 2 | | 4 |
| PLXNA3 | plexin A3 | X | Rare Single Gene Mutation, Syndromic | 2 | | 8 |
| PLXNA4 | Plexin A4 | 7 | Rare Single Gene Mutation, Functional | 2 | | 5 |
| PLXNB1 | plexin B1 | 3 | Rare Single Gene Mutation | 2 | | 4 |
| PNPLA7 | patatin like phospholipase domain containing 7 | 9 | Rare Single Gene Mutation | 2 | | 5 |
| PHB1 | prohibitin 1 | 17 | Genetic Association | 2 | | 1 |
| PIK3CG | phosphoinositide-3-kinase, catalytic, gamma polypeptide | 7 | Genetic Association | 2 | | 4 |
| POLA2 | DNA polymerase alpha 2, accessory subunit | 11 | Rare Single Gene Mutation | 2 | | 4 |
| POMT1 | protein O-mannosyltransferase 1 | 9 | Rare Single Gene Mutation | 2 | | 3 |
| PON1 | paraoxonase 1 | 7 | Genetic Association | 2 | | 5 |
| POT1 | Protection of telomeres 1 homolog (S. pombe) | 7 | Rare Single Gene Mutation | 2 | | 2 |
| PPFIA1 | PTPRF interacting protein alpha 1 | 11 | Rare Single Gene Mutation | 2 | | 4 |
| PPM1D | protein phosphatase, Mg2+/Mn2+ dependent 1D | 17 | Rare Single Gene Mutation, Syndromic | 2 | S | 9 |
| PPP1R1B | Protein phosphatase 1, regulatory (inhibitor) subunit 1B | 17 | Genetic Association | 2 | | 1 |
| PPP2R1B | protein phosphatase 2 regulatory subunit A, beta | 11 | Rare Single Gene Mutation | 2 | | 7 |
| PREX1 | Phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 | 20 | Rare Single Gene Mutation, Genetic Association | 2 | | 4 |
| PRICKLE1 | Prickle homolog 1 (Drosophila) | 12 | Rare Single Gene Mutation, Syndromic, Functional | 2 | | 6 |
| PRICKLE2 | prickle planar cell polarity protein 2 | 3 | Rare Single Gene Mutation, Functional | 2 | | 7 |
| PRKAR1B | protein kinase cAMP-dependent type I regulatory subunit beta | 7 | Rare Single Gene Mutation, Syndromic | 2 | | 7 |
| PRKCA | protein kinase C alpha | 17 | Rare Single Gene Mutation | 2 | | 5 |
| PRKCB | protein kinase C beta | 16 | Rare Single Gene Mutation, Genetic Association | 2 | | 8 |
| PRKD2 | protein kinase D2 | 19 | Rare Single Gene Mutation | 2 | | 4 |
| PRKDC | protein kinase, DNA-activated, catalytic polypeptide | 8 | Rare Single Gene Mutation, Syndromic, Functional | 2 | | 8 |
| PRKN | parkin RBR E3 ubiquitin protein ligase | 6 | Rare Single Gene Mutation, Genetic Association, Functional | 2 | | 18 |
| PRODH | Proline dehydrogenase (oxidase) 1 | 22 | Syndromic, Genetic Association | 2 | S | 6 |
| PRPF39 | pre-mRNA processing factor 39 | 14 | Rare Single Gene Mutation | 2 | | 3 |
| PRUNE2 | prune homolog 2 | 9 | Rare Single Gene Mutation, Syndromic | 2 | | 11 |
| PSD3 | pleckstrin and Sec7 domain containing 3 | 8 | Rare Single Gene Mutation, Genetic Association | 2 | | 7 |
| PTBP2 | polypyrimidine tract binding protein 2 | 1 | Rare Single Gene Mutation, Genetic Association | 2 | | 6 |
| PTCHD1-AS | PTCHD1antisense RNA (head to head) | X | Rare Single Gene Mutation | 2 | | 3 |
| PTGS2 | prostaglandin-endoperoxide synthase 2 | 1 | Rare Single Gene Mutation, Genetic Association, Functional | 2 | | 8 |
| PTPRB | protein tyrosine phosphatase, receptor type B | 12 | Rare Single Gene Mutation, Genetic Association | 2 | | 5 |
| PTPRC | protein tyrosine phosphatase, receptor type, C | 1 | Rare Single Gene Mutation, Genetic Association | 2 | | 11 |
| PTPRT | protein tyrosine phosphatase, receptor type, T | 20 | Rare Single Gene Mutation, Functional | 2 | | 10 |
| PXDN | peroxidasin | 2 | Rare Single Gene Mutation, Syndromic | 2 | | 8 |
| PYHIN1 | Pyrin and HIN domain family, member 1 | 1 | Rare Single Gene Mutation | 2 | | 4 |
| QRICH1 | glutamine rich 1 | 3 | Rare Single Gene Mutation, Syndromic | 2 | | 12 |
| RAB11FIP5 | RAB11 family interacting protein 5 | 2 | Rare Single Gene Mutation, Functional | 2 | | 6 |
| RAB2A | RAB2A, member RAS oncogene family | 8 | Rare Single Gene Mutation | 2 | | 8 |
| RAB39B | RAB39B, member RAS oncogene family | X | Rare Single Gene Mutation, Syndromic, Functional | 2 | | 17 |
| RAB43 | RAB43, member RAS oncogene family | 3 | Rare Single Gene Mutation | 2 | | 2 |
| RAD21L1 | RAD21 cohesin complex component like 1 | 20 | Rare Single Gene Mutation | 2 | | 3 |
| RANBP17 | RAN binding protein 17 | 5 | Rare Single Gene Mutation | 2 | | 8 |
| RAPGEF4 | Rap guanine nucleotide exchange factor (GEF) 4 | 2 | Rare Single Gene Mutation | 2 | | 17 |
| RASSF5 | Ras association domain family member 5 | 1 | Rare Single Gene Mutation, Genetic Association | 2 | | 4 |
| RBBP5 | RB binding protein 5, histone lysine methyltransferase complex subunit | 1 | Rare Single Gene Mutation, Functional | 2 | | 5 |
| RBFOX1 | RNA binding protein, fox-1 homolog (C. elegans) 1 | 16 | Rare Single Gene Mutation, Genetic Association | 2 | | 42 |
| RBM27 | RNA binding motif protein 27 | 5 | Rare Single Gene Mutation | 2 | | 4 |
| REEP3 | receptor accessory protein 3 | 10 | Rare Single Gene Mutation | 2 | | 3 |
| RGS7 | regulator of G-protein signaling 7 | 1 | Rare Single Gene Mutation | 2 | | 6 |
| RIMS3 | regulating synaptic membrane exocytosis 3 | 1 | Rare Single Gene Mutation | 2 | | 4 |
| RNF135 | Ring finger protein 135 | 17 | Rare Single Gene Mutation, Syndromic, Genetic Association | 2 | S | 5 |
| RNF25 | ring finger protein 25 | 2 | Rare Single Gene Mutation | 2 | | 2 |
| RNF38 | ring finger protein 38 | 9 | Rare Single Gene Mutation | 2 | | 2 |
| ROBO2 | roundabout guidance receptor 2 | 3 | Rare Single Gene Mutation, Genetic Association, Functional | 2 | | 9 |
| RPL10 | ribosomal protein L10 | X | Rare Single Gene Mutation, Syndromic | 2 | | 14 |
| RPS6KA2 | ribosomal protein S6 kinase, 90kDa, polypeptide 2 | 6 | Rare Single Gene Mutation | 2 | | 5 |
| RPS6KA3 | Ribosomal protein S6 kinase, 90kDa, polypeptide 3 | X | Rare Single Gene Mutation, Syndromic | 2 | S | 16 |
| SAE1 | SUMO1 activating enzyme subunit 1 | 19 | Rare Single Gene Mutation | 2 | | 4 |
| SAMD11 | sterile alpha motif domain containing 11 | 1 | Rare Single Gene Mutation | 2 | | 3 |
| RP11-1407O15.2 | | 17 | Rare Single Gene Mutation | 2 | | 1 |
| SASH1 | SAM and SH3 domain containing 1 | 6 | Rare Single Gene Mutation | 2 | | 3 |
| SATB2 | SATB homeobox 2 | 2 | Rare Single Gene Mutation, Syndromic, Genetic Association | 2 | S | 41 |
| SBF1 | SET binding factor 1 | 22 | Rare Single Gene Mutation | 2 | | 11 |
| SCAF1 | SR-related CTD associated factor 1 | 19 | Rare Single Gene Mutation | 2 | | 3 |
| SCAF4 | SR-related CTD associated factor 4 | 21 | Rare Single Gene Mutation, Syndromic | 2 | S | 5 |
| SCFD2 | sec1 family domain containing 2 | 4 | Rare Single Gene Mutation | 2 | | 2 |
| SCN4A | Sodium channel, voltage gated, type IV alpha subunit | 17 | Rare Single Gene Mutation | 2 | | 5 |
| RHOXF1 | Rhox homeobox family, member 1 | X | Genetic Association | 2 | | 3 |
| RIT2 | Ras-like without CAAX 2 | 18 | Genetic Association | 2 | | 3 |
| SCN9A | sodium voltage-gated channel alpha subunit 9 | 2 | Rare Single Gene Mutation | 2 | | 7 |
| SCP2 | sterol carrier protein 2 | 1 | Rare Single Gene Mutation | 2 | | 3 |
| SDC2 | syndecan 2 (heparan sulfate proteoglycan 1, cell surface-associated, fibroglycan ) | 8 | Rare Single Gene Mutation, Genetic Association | 2 | | 4 |
| SEMA5A | sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A | 5 | Rare Single Gene Mutation, Genetic Association, Functional | 2 | | 18 |
| SERPINE1 | serpin family E member 1 | 7 | Genetic Association | 2 | | 2 |
| SET | SETnuclear proto-oncogene | 9 | Rare Single Gene Mutation | 2 | | 6 |
| RPS10P2-AS1 | ribosomal protein S10 pseudogene 2 anti-sense 1 | 20 | Genetic Association, Functional | 2 | | 4 |
| SETD1B | SET domain containing 1B | 12 | Rare Single Gene Mutation, Syndromic, Functional | 2 | S | 18 |
| SETDB1 | SET domain, bifurcated 1 | 1 | Rare Single Gene Mutation | 2 | | 5 |
| SETDB2 | SET domain, bifurcated 2 | 13 | Rare Single Gene Mutation, Syndromic | 2 | | 3 |
| SEZ6L2 | SEZ6L2 seizure related 6 homolog (mouse)-like 2 | 16 | Rare Single Gene Mutation, Genetic Association | 2 | | 7 |
| SF3B1 | splicing factor 3b subunit 1 | 2 | Rare Single Gene Mutation | 2 | | 6 |
| SGSM3 | Small G protein signaling modulator 3 | 22 | Rare Single Gene Mutation | 2 | | 7 |
| SH3RF3 | SH3 domain containing ring finger 3 | 2 | Rare Single Gene Mutation | 2 | | 3 |
| SHANK1 | SH3 and multiple ankyrin repeat domains 1 | 19 | Rare Single Gene Mutation, Genetic Association | 2 | | 13 |
| SHOX | short stature homeobox | X,Y | Rare Single Gene Mutation | 2 | | 2 |
| SIN3B | SIN3 transcription regulator family member B | 19 | Rare Single Gene Mutation, Syndromic | 2 | S | 5 |
| SLC12A5 | Solute carrier family 12 (potassium/chloride transporter), member 5 | 20 | Rare Single Gene Mutation, Functional | 2 | | 9 |
| SLC1A1 | solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 | 9 | Rare Single Gene Mutation, Genetic Association | 2 | | 13 |
| SLC22A15 | Solute carrier family 22, member 15 | 1 | Genetic Association | 2 | | 1 |
| SLC22A9 | solute carrier family 22 member 9 | 11 | Rare Single Gene Mutation | 2 | | 5 |
| SLC24A2 | solute carrier family 24 member 2 | 9 | Rare Single Gene Mutation | 2 | | 4 |
| SLC25A12 | solute carrier family 25 (mitochondrial carrier, Aralar), member 12 | 2 | Rare Single Gene Mutation, Syndromic, Genetic Association, Functional | 2 | | 24 |
| SLC25A27 | solute carrier family 25 member 27 | 6 | Genetic Association | 2 | | 1 |
| SLC25A39 | solute carrier family 25 member 39 | 17 | Rare Single Gene Mutation | 2 | | 3 |
| SLC27A4 | Solute carrier family 27 (fatty acid transporter), member 4 | 9 | Rare Single Gene Mutation, Syndromic | 2 | | 3 |
| SLC29A4 | solute carrier family 29 member 4 | 7 | Rare Single Gene Mutation | 2 | | 2 |
| SLC35B1 | solute carrier family 35 member B1 | 17 | Genetic Association | 2 | | 1 |
| SLC38A10 | solute carrier family 38, member 10 | 17 | Rare Single Gene Mutation | 2 | | 3 |
| SLC4A10 | solute carrier family 4, sodium bicarbonate transporter-like, member 10 | 2 | Rare Single Gene Mutation, Genetic Association | 2 | | 7 |
| SLC6A3 | Solute carrier family 6 (neurotransmitter transporter), member 3 | 5 | Rare Single Gene Mutation, Syndromic, Genetic Association, Functional | 2 | | 16 |
| SLC6A4 | solute carrier family 6 (neurotransmitter transporter, serotonin), member 4 | 17 | Rare Single Gene Mutation, Genetic Association, Functional | 2 | | 28 |
| SLC6A8 | solute carrier family 6 (neurotransmitter transporter, creatine), member 8 | X | Rare Single Gene Mutation, Syndromic | 2 | | 20 |
| SLC7A3 | Solute carrier family 7 (cationic amino acid transporter, y+ system), member 3 | X | Rare Single Gene Mutation | 2 | | 2 |
| SLC7A5 | solute carrier family 7 member 5 | 16 | Rare Single Gene Mutation, Functional | 2 | | 5 |
| SLC7A7 | solute carrier family 7 member 7 | 14 | Rare Single Gene Mutation | 2 | | 3 |
| SLC9A9 | solute carrier family 9 (sodium/hydrogen exchanger), member 9 | 3 | Rare Single Gene Mutation, Genetic Association, Functional | 2 | | 15 |
| SLCO1B3 | Solute carrier organic anion transporter family, member 1B3 | 12 | Rare Single Gene Mutation | 2 | | 5 |
| SLITRK5 | SLIT and NTRK like family member 5 | 13 | Rare Single Gene Mutation, Functional | 2 | | 10 |
| SMAD4 | SMAD family member 4 | 18 | Rare Single Gene Mutation | 2 | | 8 |
| SMC3 | structural maintenance of chromosomes 3 | 10 | Rare Single Gene Mutation, Syndromic | 2 | S | 11 |
| SMG6 | SMG6, nonsense mediated mRNA decay factor | 17 | Rare Single Gene Mutation | 2 | | 3 |
| SMURF1 | SMAD specific E3 ubiquitin protein ligase 1 | 7 | Rare Single Gene Mutation | 2 | | 2 |
| SNAP25 | Synaptosomal-associated protein, 25kDa | 20 | Rare Single Gene Mutation, Genetic Association | 2 | | 9 |
| SND1 | staphylococcal nuclease and tudor domain containing 1 | 7 | Rare Single Gene Mutation, Genetic Association | 2 | | 9 |
| SNTG2 | syntrophin gamma 2 | 2 | Rare Single Gene Mutation | 2 | | 6 |
| SNX5 | sorting nexin 5 | 20 | Rare Single Gene Mutation | 2 | | 5 |
| SOD1 | superoxide dismutase 1 | 21 | Rare Single Gene Mutation, Genetic Association, Functional | 2 | | 3 |
| SORCS3 | sortilin related VPS10 domain containing receptor 3 | 10 | Rare Single Gene Mutation, Syndromic, Genetic Association | 2 | | 6 |
| SPARCL1 | SPARC like 1 | 4 | Rare Single Gene Mutation, Functional | 2 | | 5 |
| SPEN | spenfamily transcriptional repressor | 1 | Rare Single Gene Mutation, Syndromic | 2 | | 14 |
| SPP2 | secreted phosphoprotein 2 | 2 | Rare Single Gene Mutation | 2 | | 4 |
| SPRY2 | sprouty RTK signaling antagonist 2 | 13 | Rare Single Gene Mutation, Functional | 2 | | 3 |
| SPTBN1 | spectrin beta, non-erythrocytic 1 | 2 | Rare Single Gene Mutation, Syndromic | 2 | S | 9 |
| SRGAP3 | SLIT-ROBO Rho GTPase activating protein 3 | 3 | Rare Single Gene Mutation | 2 | | 6 |
| SRRM2 | serine/arginine repetitive matrix 2 | 16 | Rare Single Gene Mutation, Syndromic | 2 | S | 12 |
| SRSF11 | serine and arginine rich splicing factor 11 | 1 | Rare Single Gene Mutation | 2 | | 6 |
| SSRP1 | structure specific recognition protein 1 | 11 | Rare Single Gene Mutation | 2 | | 3 |
| ST7 | suppression of tumorigenicity 7 | 7 | Rare Single Gene Mutation | 2 | | 4 |
| ST8SIA2 | ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 | 15 | Rare Single Gene Mutation, Genetic Association, Functional | 2 | | 12 |
| STX1A | Syntaxin 1A (brain) | 7 | Rare Single Gene Mutation, Genetic Association | 2 | | 6 |
| STXBP5 | Syntaxin binding protein 5 (tomosyn) | 6 | Rare Single Gene Mutation | 2 | | 7 |
| STYK1 | Serine/threonine/tyrosine kinase 1 | 12 | Rare Single Gene Mutation, Genetic Association | 2 | | 3 |
| SUPT16H | SPT16 homolog, facilitates chromatin remodeling subunit | 14 | Rare Single Gene Mutation, Syndromic | 2 | S | 8 |
| SYAP1 | Synapse associated protein 1 | X | Rare Single Gene Mutation | 2 | | 2 |
| SYN2 | Synapsin II | 3 | Rare Single Gene Mutation, Genetic Association, Functional | 2 | | 6 |
| SYNCRIP | synaptotagmin binding cytoplasmic RNA interacting protein | 6 | Rare Single Gene Mutation, Syndromic | 2 | | 9 |
| SYNE1 | spectrin repeat containing, nuclear envelope 1 | 6 | Rare Single Gene Mutation, Genetic Association | 2 | | 22 |
| SYNJ1 | synaptojanin 1 | 21 | Rare Single Gene Mutation | 2 | | 2 |
| TAF1C | TATA-box binding protein associated factor, RNA polymerase I subunit C | 16 | Rare Single Gene Mutation, Genetic Association | 2 | | 3 |
| TAF4 | TATA-box binding protein associated factor 4 | 20 | Rare Single Gene Mutation, Syndromic | 2 | S | 4 |
| TAF6 | TATA-box binding protein associated factor 6 | 7 | Rare Single Gene Mutation | 2 | | 4 |
| TAOK2 | TAO kinase 2 | 16 | Rare Single Gene Mutation, Functional | 2 | | 8 |
| TBC1D31 | TBC1 domain family, member 31 | 8 | Rare Single Gene Mutation | 2 | | 6 |
| TBC1D5 | TBC1 domain family, member 5 | 3 | Rare Single Gene Mutation, Genetic Association | 2 | | 9 |
| STK39 | serine threonine kinase 39 (STE20/SPS1 homolog, yeast) | 2 | Genetic Association | 2 | | 5 |
| SYT17 | synaptotagmin XVII | 16 | Genetic Association | 2 | | 2 |
| TBL1X | transducin (beta)-like 1X-linked | X | Genetic Association | 2 | | 1 |
| TDO2 | tryptophan 2,3-dioxygenase | 4 | Genetic Association | 2 | | 4 |
| TECTA | tectorin alpha | 11 | Rare Single Gene Mutation | 2 | | 8 |
| TERB2 | telomere repeat binding bouquet formation protein 2 | 15 | Rare Single Gene Mutation | 2 | | 1 |
| TERF2 | Telomeric repeat binding factor 2 | 16 | Rare Single Gene Mutation | 2 | | 5 |
| TET2 | Tet methylcytosine dioxygenase 2 | 4 | Rare Single Gene Mutation | 2 | | 6 |
| THBS1 | Thrombospondin 1 | 15 | Rare Single Gene Mutation, Genetic Association | 2 | | 5 |
| THRA | thyroid hormone receptor alpha | 17 | Rare Single Gene Mutation, Functional | 2 | | 5 |
| TM4SF19 | transmembrane 4 L six family member 19 | 3 | Rare Single Gene Mutation | 2 | | 3 |
| TMEM39B | transmembrane protein 39B | 1 | Rare Single Gene Mutation | 2 | | 4 |
| TMLHE | trimethyllysine hydroxylase, epsilon | X | Rare Single Gene Mutation, Genetic Association | 2 | | 6 |
| TNRC6B | Trinucleotide repeat containing 6B | 22 | Rare Single Gene Mutation, Syndromic | 2 | | 16 |
| TNRC6C | trinucleotide repeat containing adaptor 6C | 17 | Rare Single Gene Mutation | 2 | | 6 |
| TOP2B | DNA topoisomerase II beta | 3 | Rare Single Gene Mutation, Functional | 2 | | 5 |
| TOP3B | Topoisomerase (DNA) III beta | 22 | Rare Single Gene Mutation, Genetic Association, Functional | 2 | | 7 |
| TPO | Thyroid peroxidase | 2 | Genetic Association | 2 | | 1 |
| TRAPPC9 | trafficking protein particle complex 9 | 8 | Rare Single Gene Mutation, Syndromic | 2 | | 19 |
| TRPC6 | Transient receptor potential cation channel, subfamily C, member 6 | 11 | Rare Single Gene Mutation | 2 | | 5 |
| TRPM1 | transient receptor potential cation channel subfamily M member 1 | 15 | Rare Single Gene Mutation | 2 | | 4 |
| TRRAP | transformation/transcription domain associated protein | 7 | Rare Single Gene Mutation, Syndromic | 2 | S | 11 |
| TSPAN17 | tetraspanin 17 | 5 | Rare Single Gene Mutation | 2 | | 4 |
| TSPAN4 | tetraspanin 4 | 11 | Rare Single Gene Mutation | 2 | | 4 |
| TSPAN7 | tetraspanin 7 | X | Rare Single Gene Mutation | 2 | | 8 |
| TSPOAP1 | TSPO associated protein 1 | 17 | Rare Single Gene Mutation | 2 | | 6 |
| TTN | titin | 2 | Rare Single Gene Mutation, Syndromic | 2 | S | 27 |
| TUBGCP5 | tubulin, gamma complex associated protein 5 | 15 | Rare Single Gene Mutation | 2 | | 6 |
| UBE3C | Ubiquitin protein ligase E3C | 7 | Rare Single Gene Mutation, Syndromic | 2 | | 5 |
| UBN2 | ubinuclein 2 | 7 | Rare Single Gene Mutation | 2 | | 5 |
| UBR5 | ubiquitin protein ligase E3 component n-recognin 5 | 8 | Rare Single Gene Mutation | 2 | | 10 |
| UIMC1 | ubiquitin interaction motif containing 1 | 5 | Rare Single Gene Mutation | 2 | | 6 |
| UNC13A | unc-13 homolog A | 19 | Rare Single Gene Mutation, Syndromic | 2 | S | 9 |
| UNC79 | unc-79 homolog, NALCN channel complex subunit | 14 | Rare Single Gene Mutation, Functional | 2 | | 7 |
| UNC80 | unc-80 homolog, NALCN activator | 2 | Rare Single Gene Mutation | 2 | | 9 |
| UPF2 | UPF2, regulator of nonsense mediated mRNA decay | 10 | Rare Single Gene Mutation, Functional | 2 | | 10 |
| USH2A | usherin | 1 | Rare Single Gene Mutation | 2 | | 8 |
| USP15 | ubiquitin specific peptidase 15 | 12 | Rare Single Gene Mutation | 2 | | 3 |
| USP45 | Ubiquitin specific peptidase 45 | 6 | Rare Single Gene Mutation | 2 | | 5 |
| USP7 | Ubiquitin specific peptidase 7 (herpes virus-associated) | 16 | Rare Single Gene Mutation, Syndromic, Functional | 2 | S | 11 |
| USP9Y | ubiquitin specific peptidase 9, Y-linked | Y | Rare Single Gene Mutation, Genetic Association | 2 | | 2 |
| VIL1 | Villin 1 | 2 | Rare Single Gene Mutation | 2 | | 3 |
| VSIG4 | V-set and immunoglobulin domain containing 4 | X | Rare Single Gene Mutation | 2 | | 2 |
| WDFY4 | WDFY family member 4 | 10 | Rare Single Gene Mutation | 2 | | 9 |
| WNK3 | WNK lysine deficient protein kinase 3 | X | Rare Single Gene Mutation | 2 | | 6 |
| WNT1 | Wingless-type MMTV integration site family, member 1 | 12 | Rare Single Gene Mutation, Syndromic, Genetic Association | 2 | | 5 |
| WWOX | WW domain containing oxidoreductase | 16 | Rare Single Gene Mutation, Syndromic | 2 | | 13 |
| XPO1 | exportin 1 | 2 | Rare Single Gene Mutation, Genetic Association | 2 | | 8 |
| YEATS2 | YEATS domain containing 2 | 3 | Rare Single Gene Mutation, Genetic Association | 2 | | 3 |
| YTHDC2 | YTH domain containing 2 | 5 | Rare Single Gene Mutation, Genetic Association | 2 | | 6 |
| YWHAE | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon | 17 | Rare Single Gene Mutation | 2 | | 5 |
| ZBTB16 | Zinc finger and BTB domain containing 16 | 11 | Rare Single Gene Mutation, Genetic Association, Functional | 2 | | 3 |
| ZC3H11A | zinc finger CCCH-type containing 11A | 1 | Rare Single Gene Mutation | 2 | | 4 |
| TRIM33 | Tripartite motif containing 33 | 1 | Genetic Association | 2 | | 1 |
| UBE2H | ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast) | 7 | Genetic Association | 2 | | 2 |
| VASH1 | vasohibin 1 | 14 | Genetic Association | 2 | | 4 |
| VDR | vitamin D receptor | 12 | Genetic Association, Functional | 2 | | 10 |
| ZC3H4 | zinc finger CCCH-type containing 4 | 19 | Rare Single Gene Mutation | 2 | | 6 |
| ZFYVE26 | zinc finger FYVE-type containing 26 | 14 | Rare Single Gene Mutation | 2 | | 6 |
| ZMIZ1 | zinc finger MIZ-type containing 1 | 10 | Rare Single Gene Mutation, Syndromic | 2 | S | 8 |
| ZMYM2 | zinc finger MYM-type containing 2 | 13 | Rare Single Gene Mutation, Syndromic | 2 | S | 8 |
| ZMYND11 | Zinc finger, MYND-type containing 11 | 10 | Rare Single Gene Mutation, Syndromic | 2 | | 13 |
| ZNF18 | zinc finger protein 18 | 17 | Rare Single Gene Mutation | 2 | | 2 |
| ZNF385B | Zinc finger protein 385B | 2 | Genetic Association | 2 | | 2 |
| ZNF517 | Zinc finger protein 517 | 8 | Rare Single Gene Mutation | 2 | | 5 |
| ZNF548 | zinc finger protein 548 | 19 | Rare Single Gene Mutation | 2 | | 4 |
| ZNF559 | Zinc finger protein 559 | 19 | Rare Single Gene Mutation | 2 | | 8 |
| ZNF626 | zinc finger protein 626 | 19 | Rare Single Gene Mutation | 2 | | 3 |
| ZNF711 | zinc finger protein 711 | X | Rare Single Gene Mutation | 2 | | 5 |
| ZNF713 | Zinc finger protein 713 | 7 | Rare Single Gene Mutation | 2 | | 3 |
| ZNF774 | Zinc finger protein 774 | 15 | Rare Single Gene Mutation | 2 | | 4 |
| ZNF804A | Zinc finger protein 804A | 2 | Rare Single Gene Mutation, Genetic Association, Functional | 2 | | 16 |
| ZNF827 | Zinc finger protein 827 | 4 | Rare Single Gene Mutation, Genetic Association | 2 | | 3 |
| ZWILCH | zwilchkinetochore protein | 15 | Rare Single Gene Mutation | 2 | | 5 |