ARXaristaless related homeobox

SFARI Gene Score

High Confidence, Syndromic Criteria 1.1, Syndromic

Autism Reports / Total Reports

9 / 27

Rare Variants / Common Variants

57 / 0

EAGLE Score

13.8

Strong Learn More

Aliases

ARX, aristaless related homeobox, ISSX, PRTS, MRX36, MRX43, MRX54, MRXS1

Associated Syndromes

Chromosome Band

Xp21.3

Associated Disorders

DD/NDD, ID, EPS, ASD

Genetic Category

Rare Single Gene Mutation, Syndromic

Relevance to Autism

This gene has been associated with syndromic autism, where a subpopulation of individuals with a given syndrome develop autism. For example, a number of studies have shown that mutations in the ARX gene are identified with a diverse spectrum of disease that includes cognitive impairment, epilepsy and severe cortical malformations.

Molecular Function

This gene is a homeobox-containing gene expressed during development. The encoded protein is a transcription factor required for normal brain development.

SFARI Genomic Platforms

GPF browser SFARI genome browser

Reports (27)
Variants (57)
Gene Score
Protein Interactions (938)

Reports related to ARX (27 Reports)

#	Type	Title	Author, Year	Autism Report	Associated Disorders
1	Highly Cited	ARX, a novel Prd-class-homeobox gene highly expressed in the telencephalon, is mutated in X-linked mental retardation	Bienvenu T , et al. (2002)	No	-
2	Highly Cited	Infantile spasms, dystonia, and other X-linked phenotypes caused by mutations in Aristaless related homeobox gene, ARX	Strmme P , et al. (2002)	No	-
3	Highly Cited	Variable expression of mental retardation, autism, seizures, and dystonic hand movements in two families with an identical ARX gene mutation	Turner G , et al. (2002)	No	-
4	Highly Cited	Mutation of ARX causes abnormal development of forebrain and testes in mice and X-linked lissencephaly with abnormal genitalia in humans	Kitamura K , et al. (2002)	No	-
5	Primary	The ARX story (epilepsy, mental retardation, autism, and cerebral malformations): one gene leads to many phenotypes	Sherr EH (2003)	Yes	-
6	Recent Recommendation	ARX: a gene for all seasons	Gcz J , et al. (2006)	No	-
7	Support	Oligogenic heterozygosity in individuals with high-functioning autism spectrum disorders	Schaaf CP , et al. (2011)	Yes	-
8	Support	Novel mutation in ARX associated with early hand preference and a mild phenotype	Kuwaik GA , et al. (2012)	No	-
9	Support	A regulatory path associated with X-linked intellectual disability and epilepsy links KDM5C to the polyalanine expansions in ARX	Poeta L , et al. (2012)	No	-
10	Support	Identification of risk genes for autism spectrum disorder through copy number variation analysis in Austrian families	Egger G , et al. (2014)	Yes	-
11	Support	The contribution of de novo coding mutations to autism spectrum disorder	Iossifov I et al. (2014)	Yes	-
12	Support	Diagnostic Targeted Resequencing in 349 Patients with Drug-Resistant Pediatric Epilepsies Identifies Causative Mutations in 30 Different Genes	Parrini E , et al. (2016)	No	-
13	Support	Genomic diagnosis for children with intellectual disability and/or developmental delay	Bowling KM , et al. (2017)	No	Epilepsy/seizures
14	Recent Recommendation	ARX polyalanine expansion mutations lead to migration impediment in the rostral cortex coupled with a developmental deficit of calbindin-positive cortical GABAergic interneurons	Lee K , et al. (2017)	No	-
15	Support	Diagnostic exome sequencing of syndromic epilepsy patients in clinical practice	Tumien B , et al. (2017)	No	-
16	Support	The combination of whole-exome sequencing and copy number variation sequencing enables the diagnosis of rare neurological disorders	Jiao Q , et al. (2019)	Yes	-
17	Support	Neurological Diseases With Autism Spectrum Disorder: Role of ASD Risk Genes	Xiong J , et al. (2019)	Yes	ID, epilepsy/seizures
18	Support	Constraint and conservation of paired-type homeodomains predicts the clinical outcome of missense variants of uncertain significance	Thai MHN et al. (2020)	No	ASD, epilepsy/seizures
19	Support	-	Liu L et al. (2021)	No	ASD, DD
20	Support	-	Zou D et al. (2021)	No	-
21	Support	-	Rasheed M et al. (2021)	No	-
22	Support	-	Chen S et al. (2021)	Yes	DD, ID
23	Support	-	Chuan Z et al. (2022)	No	DD
24	Support	-	Zhou X et al. (2022)	Yes	-
25	Support	-	Iskandar K et al. (2023)	Yes	-
26	Support	-	Ko YJ et al. (2023)	No	-
27	Support	-	Mathilde Gras et al. (2024)	No	ASD, ADHD

Rare Variants (57)

Allele Change	Residue Change	Variant Type	Inheritance Pattern	Parental Transmission	Family Type	PubMed ID	Author, Year
-	-	copy_number_loss	-	-	-	14631200	Sherr EH (2003)
-	-	copy_number_gain	De novo	-	-	24643514	Egger G , et al. (2014)
c.994C>T	p.Arg332Cys	missense_variant	-	-	-	14631200	Sherr EH (2003)
c.1058C>T	p.Pro353Leu	missense_variant	-	-	-	14631200	Sherr EH (2003)
c.333ins21	Add 7 Alas	inframe_insertion	-	-	-	14631200	Sherr EH (2003)
c.370G>T	p.Glu124Ter	stop_gained	Unknown	-	-	34145886	Zou D et al. (2021)
c.790del	p.Arg264GlyfsTer61	frameshift_variant	-	-	-	14631200	Sherr EH (2003)
c.1399G>T	p.Gly467Ter	stop_gained	De novo	-	-	35571021	Chuan Z et al. (2022)
c.490A>G	p.Gln163Arg	missense_variant	-	-	-	11971879	Bienvenu T , et al. (2002)
c.856G>A	p.Gly286Ser	missense_variant	-	-	-	11971879	Bienvenu T , et al. (2002)
c.591C>A	p.Gly197%3D	synonymous_variant	De novo	-	-	35982159	Zhou X et al. (2022)
c.487C>T	p.Gln163Ter	stop_gained	De novo	-	-	37879892	Mathilde Gras et al. (2024)
c.521C>A	p.Ser174Ter	stop_gained	De novo	-	-	37879892	Mathilde Gras et al. (2024)
c.1111C>T	p.Arg371Ter	stop_gained	De novo	-	-	37879892	Mathilde Gras et al. (2024)
c.1349C>A	p.Ser450Ter	stop_gained	De novo	-	-	37879892	Mathilde Gras et al. (2024)
c.1621G>T	p.Glu541Ter	stop_gained	Familial	Maternal	-	37645600	Ko YJ et al. (2023)
c.196G>A	p.Gly66Ser	missense_variant	De novo	-	Simplex	37645600	Ko YJ et al. (2023)
c.304ins(GCG)2	p.(115A2)	inframe_insertion	Unknown	-	-	34800434	Chen S et al. (2021)
c.1058C>T	p.Pro353Leu	missense_variant	De novo	-	-	27864847	Parrini E , et al. (2016)
c.1151G>A	p.Arg384His	missense_variant	De novo	-	Simplex	33951346	Liu L et al. (2021)
c.1469C>T	p.Pro490Leu	missense_variant	De novo	-	Simplex	33951346	Liu L et al. (2021)
c.989G>A	p.Arg330His	missense_variant	Familial	Maternal	-	37645600	Ko YJ et al. (2023)
c.202C>A	p.Pro68Thr	missense_variant	Familial	Maternal	-	34800434	Chen S et al. (2021)
c.1120G>T	p.Val374Phe	missense_variant	De novo	-	-	37879892	Mathilde Gras et al. (2024)
c.1124G>T	p.Trp375Leu	missense_variant	De novo	-	-	37879892	Mathilde Gras et al. (2024)
c.1139G>A	p.Arg380Gln	missense_variant	De novo	-	-	37879892	Mathilde Gras et al. (2024)
c.121dup	p.Met41AsnfsTer29	frameshift_variant	De novo	-	-	30945278	Jiao Q , et al. (2019)
c.202C>A	p.Pro68Thr	missense_variant	Familial	Maternal	-	31031587	Xiong J , et al. (2019)
c.1150C>T	p.Arg384Cys	missense_variant	De novo	-	Simplex	32383243	Thai MHN et al. (2020)
c.667A>C	p.Thr223Pro	missense_variant	Unknown	-	Simplex	21624971	Schaaf CP , et al. (2011)
c.835G>A	p.Ala279Thr	missense_variant	De novo	-	Simplex	25363768	Iossifov I et al. (2014)
c.166A>G	p.Ser56Gly	missense_variant	Familial	Maternal	-	28554332	Bowling KM , et al. (2017)
c.1441_1447dup	p.Arg483IlefsTer51	frameshift_variant	De novo	-	-	35571021	Chuan Z et al. (2022)
c.518dup	p.Ser174ValfsTer64	frameshift_variant	De novo	-	-	37879892	Mathilde Gras et al. (2024)
c.1579_1582del	p.Arg527AlafsTer5	frameshift_variant	De novo	-	-	29286531	Tumien B , et al. (2017)
c.1117C>T	p.Gln373Ter	stop_gained	Familial	Maternal	Simplex	12379852	Kitamura K , et al. (2002)
c.1191del	p.Leu398CysfsTer65	frameshift_variant	De novo	-	-	37879892	Mathilde Gras et al. (2024)
c.1109C>T	p.Ala370Val	missense_variant	Familial	Maternal	Simplex	32383243	Thai MHN et al. (2020)
c.201_204del	p.Pro68ArgfsTer99	frameshift_variant	De novo	-	-	37879892	Mathilde Gras et al. (2024)
c.1449-1_1456del	-	frameshift_variant	Familial	Maternal	Multiplex	34452636	Rasheed M et al. (2021)
c.304insGCGGCG	Add 2 Alas	inframe_insertion	Familial	Maternal	-	11971879	Bienvenu T , et al. (2002)
c.1206del	p.Pro403ArgfsTer60	frameshift_variant	De novo	-	Simplex	36845779	Iskandar K et al. (2023)
c.995G>A	p.Arg332His	missense_variant	Familial	Maternal	Simplex	12379852	Kitamura K , et al. (2002)
c.1372del	p.Ala458ArgfsTer5	frameshift_variant	Unknown	-	Simplex	12379852	Kitamura K , et al. (2002)
c.428_451dupGGGCCGCCGCGGCAGCCGCGGCCG	p.Gly143_Ala150dup	inframe_insertion	-	-	-	14631200	Sherr EH (2003)
c.1028T>A	p.Leu343Gln	missense_variant	Familial	Maternal	Multiplex	12379852	Kitamura K , et al. (2002)
c.424_455del	p.Ala142ArgfsTer85	frameshift_variant	Unknown	-	Simplex	12379852	Kitamura K , et al. (2002)
c.1188_1189insC	p.Gly397ArgfsTer135	frameshift_variant	Unknown	-	Simplex	12379852	Kitamura K , et al. (2002)
c.1112G>A	p.Arg371Gln	missense_variant	Familial	Maternal	Extended multiplex	32383243	Thai MHN et al. (2020)
c.792del	p.Arg265AlafsTer60	frameshift_variant	Familial	Maternal	Simplex	12379852	Kitamura K , et al. (2002)
c.98T>C	p.Leu33Pro	missense_variant	Familial	Maternal	Multi-generational	11971879	Bienvenu T , et al. (2002)
c.1002_1007delinsTGTACCA	p.Phe335ValfsTer197	frameshift_variant	De novo	-	-	28554332	Bowling KM , et al. (2017)
c.430_431insGCCGCCGCGGCAGCCGCGGCCGGG	p.Gly143_Ala144insGlyArgArgGlySerArgGlyArg	inframe_insertion	-	-	-	14631200	Sherr EH (2003)
c.428_451dupGGGCCGCCGCGGCAGCCGCGGCCG	p.Gly143_Ala150dup	inframe_insertion	De novo	-	Simplex	11971879	Bienvenu T , et al. (2002)
c.428_451dupGGGCCGCCGCGGCAGCCGCGGCCG	p.Gly143_Ala150dup	inframe_insertion	Familial	Maternal	-	11971879	Bienvenu T , et al. (2002)
c.428_451dupGGGCCGCCGCGGCAGCCGCGGCCG	p.Gly143_Ala150dup	inframe_insertion	Familial	Maternal	Multi-generational	11971879	Bienvenu T , et al. (2002)
c.441_442insAGCCGCGGCCGCGGCCGCCGCGGC	p.Ala147_Ala148insSerArgGlyArgGlyArgArgGly	inframe_insertion	Familial	Maternal	Multiplex	22922607	Kuwaik GA , et al. (2012)

Common Variants

No common variants reported.

Current Score
Scoring History
3rd Party Scoring

SFARI Gene score

High Confidence, Syndromic

Score Delta: Score remained at 1S

criteria met

See SFARI Gene'scoring criteria

High Confidence

See all Category 1 Genes

We considered a rigorous statistical comparison between cases and controls, yielding genome-wide statistical significance, with independent replication, to be the strongest possible evidence for a gene. These criteria were relaxed slightly for category 2.

Syndromic

See all Category S Genes

The syndromic category includes mutations that are associated with a substantial degree of increased risk and consistently linked to additional characteristics not required for an ASD diagnosis. If there is independent evidence implicating a gene in idiopathic ASD, it will be listed as "#S" (e.g., 2S, 3S, etc.). If there is no such independent evidence, the gene will be listed simply as "S."

4/1/2021

Score remained at 1

Description

Mutations in ARX cause a spectrum of ARX- associated disorders, including X-linked mental retardation, X-linked infantile spasms and X-linked lissencephaly with ambiguous genitalia. A proportion of individuals with each of these disorders also has autism spectrum disorder. Category 4 evidence for the role of ARX in idiopathic evidence includes two studies in which the authors screened for ARX mutations in individuals with autism. In one study of 226 males with ASD+ID, no mutations were found (Chase et al. 2007). In another study, two families each carried a 24-bp duplication in ARX, and three individuals had autism or autistic features in addition to epilepsy or ID.

Reports Added

[Confirming the contribution and genetic spectrum of de novo mutation in infantile spasms: Evidence from a Chinese cohort2021]

4/1/2020

Score remained at 1

Description

Reports Added

[Constraint and conservation of paired-type homeodomains predicts the clinical outcome of missense variants of uncertain significance2020]

10/1/2019

Increased from S to 1

New Scoring Scheme

Description

Reports Added

[New Scoring Scheme]

4/1/2019

Increased from S to S

Description

Reports Added

[The combination of whole-exome sequencing and copy number variation sequencing enables the diagnosis of rare neurological disorders.2019] [Neurological Diseases With Autism Spectrum Disorder: Role of ASD Risk Genes.2019]

7/1/2017

Increased from S to S

Description

Reports Added

[ARX polyalanine expansion mutations lead to migration impediment in the rostral cortex coupled with a developmental deficit of calbindin-positive c...2017]

4/1/2017

Increased from S to S

Description

Reports Added

[The ARX story (epilepsy, mental retardation, autism, and cerebral malformations): one gene leads to many phenotypes.2003] [Oligogenic heterozygosity in individuals with high-functioning autism spectrum disorders.2011] [Identification of risk genes for autism spectrum disorder through copy number variation analysis in Austrian families.2014] [Novel mutation in ARX associated with early hand preference and a mild phenotype.2012] [ARX, a novel Prd-class-homeobox gene highly expressed in the telencephalon, is mutated in X-linked mental retardation.2002] [Mutation of ARX causes abnormal development of forebrain and testes in mice and X-linked lissencephaly with abnormal genitalia in humans.2002] [Infantile spasms, dystonia, and other X-linked phenotypes caused by mutations in Aristaless related homeobox gene, ARX.2002] [Variable expression of mental retardation, autism, seizures, and dystonic hand movements in two families with an identical ARX gene mutation.2002] [ARX: a gene for all seasons.2006] [A regulatory path associated with X-linked intellectual disability and epilepsy links KDM5C to the polyalanine expansions in ARX.2012] [The contribution of de novo coding mutations to autism spectrum disorder2014] [Diagnostic Targeted Resequencing in 349 Patients with Drug-Resistant Pediatric Epilepsies Identifies Causative Mutations in 30 Different Genes.2016] [Genomic diagnosis for children with intellectual disability and/or developmental delay.2017]

1/1/2017

Increased from S to S

Description

Reports Added

[Diagnostic Targeted Resequencing in 349 Patients with Drug-Resistant Pediatric Epilepsies Identifies Causative Mutations in 30 Different Genes.2016]

1/1/2016

Increased from S to S

Description

Reports Added

4/1/2015

Increased from S to S

Description

Reports Added

[Mutation of ARX causes abnormal development of forebrain and testes in mice and X-linked lissencephaly with abnormal genitalia in humans.2002]

4/1/2014

No data

Increased from No data to S

Description

Reports Added

[Identification of risk genes for autism spectrum disorder through copy number variation analysis in Austrian families.2014]

Krishnan Probability Score

Score 0.41594966117007

Ranking 21412/25841 scored genes

[Show Scoring Methodology]

Krishnan and colleagues generated probability scores genome-wide by using a machine learning approach on a human brain-specific gene network. The method was first presented in Nat Neurosci 19, 1454-1462 (2016), and scores for more than 25,000 RefSeq genes can be accessed in column G of supplementary table 3 (see: http://www.nature.com/neuro/journal/v19/n11/extref/nn.4353-S5.xlsx). A searchable browser, with the ability to view networks of associated ASD risk genes, can be found at asd.princeton.edu.

Original Source

ExAC Score

Score 0.75306908332634

Ranking 4196/18225 scored genes

[Show Scoring Methodology]

The Exome Aggregation Consortium (ExAC) is a summary database of 60,706 exomes that has been widely used to estimate 'constraint' on mutation for individual genes. It was introduced by Lek et al. Nature 536, 285-291 (2016), and the ExAC browser can be found at exac.broadinstitute.org. The pLI score was developed as measure of intolerance to loss-of- function mutation. A pLI > 0.9 is generally viewed as highly constrained, and thus any loss-of- function mutations in autism in such a gene would be more likely to confer risk. For a full list of pLI scores see: ftp://ftp.broadinstitute.org/pub/ExAC_release/release0.3.1/functional_gene_constraint/fordist_cle aned_exac_nonTCGA_z_pli_rec_null_data.txt

Original Source

Sanders TADA Score

Score 0.9183935086211

Ranking 8814/18665 scored genes

[Show Scoring Methodology]

The TADA score ('Transmission and De novo Association') was introduced by He et al. PLoS Genet 9(8):e1003671 (2013), and is a statistic that integrates evidence from both de novo and transmitted mutations. It forms the basis for the claim of 65 individual genes being strongly associated with autism risk at a false discovery rate of 0.1 (Sanders et al. Neuron 87, 1215-1233 (2015)). The calculated TADA score for 18,665 RefSeq genes can be found in column P of Supplementary Table 6 in the Sanders et al. paper (the column headed 'tadaFdrAscSscExomeSscAgpSmallDel'), which represents a combined analysis of exome data and small de novo deletions (see www.cell.com/cms/attachment/2038545319/2052606711/mmc7.xlsx).

Original Source

Zhang D Score

Score 0.095186436387251

Ranking 6236/20870 scored genes

[Show Scoring Methodology]

The DAMAGES score (disease-associated mutation analysis using gene expression signatures), or D score, was developed to combine evidence from de novo loss-of- function mutation with evidence from cell-type- specific gene expression in the mouse brain (specifically translational profiles of 24 specific mouse CNS cell types isolated from 6 different brain regions). Genes with positive D scores are more likely to be associated with autism risk, with higher-confidence genes having higher D scores. This statistic was first presented by Zhang & Shen (Hum Mutat 38, 204- 215 (2017), and D scores for more than 20,000 RefSeq genes can be found in column M in supplementary table 2 from that paper.

Original Source

External PIN Data

BioGRID Human Protein Reference Database

Interactome

Notice: due to the large number of ARX's protein interactions, this visualization has been limited to connections with genes present in the SFARI Gene database.

Protein Binding
DNA Binding
RNA Binding
Protein Modification
Direct Regulation
ASD-Linked Genes

Interaction Table

Interactor Symbol	Interactor Name	Interactor Organism	Interactor Type	Entrez ID	Uniprot ID
0610010F05Rik	RIKEN cDNA 0610010F05 gene	Mouse	DNA Binding	71675	Q68FF0
1100001G20Rik	RIKEN cDNA 1100001G20 gene	Mouse	DNA Binding	66107	Q8BTE6
1300001I01Rik	RIKEN cDNA 1300001I01 gene	Mouse	DNA Binding	74148	Q5SW19
1700007G11Rik	RIKEN cDNA 1700007G11 gene	Mouse	DNA Binding	75784	Q810M1
1700018B24Rik	RIKEN cDNA 1700018B24 gene	Mouse	DNA Binding	66332	N/A
1700019O17Rik	RIKEN cDNA 1700019O17 gene	Mouse	DNA Binding	71863	Q9DA60
1700020N01Rik	RIKEN cDNA 1700020N01 gene	Mouse	DNA Binding	67692	N/A
1700034H14Rik	RIKEN cDNA 1700034H14 gene	Mouse	DNA Binding	67105	Q3THX0
1700123K08Rik	RIKEN cDNA 1700123K08 gene	Mouse	DNA Binding	76658	Q9D991
2310046O06Rik	RIKEN cDNA 2310046O06 gene	Mouse	DNA Binding	78323	Q14DQ1
2310057J18Rik	RIKEN cDNA 2310057J18 gene	Mouse	DNA Binding	67719	Q8C6C9
2410066E13Rik	RIKEN cDNA 2410066E13 gene	Mouse	DNA Binding	68235	Q9CR65
2610020H08Rik	RIKEN cDNA 2610020H08 gene	Mouse	DNA Binding	434234	Q7TSF9
2610318N02Rik	RIKEN cDNA 2610318N02 gene	Mouse	DNA Binding	70458	Q80VT5
2810428I15Rik	RIKEN cDNA 2810428I15 gene	Mouse	DNA Binding	66462	Q9CYZ6
2900092E17Rik	RIKEN cDNA 2900092E17 gene	Mouse	DNA Binding	67278	Q99L02
4632428N05Rik	RIKEN cDNA 4632428N05 gene	Mouse	DNA Binding	74048	E9PUF5
4921511H03Rik	RIKEN cDNA 4921511H03 gene	Mouse	DNA Binding	70920	Q9D5W8
4921539E11Rik	RIKEN cDNA 4921539E11 gene	Mouse	DNA Binding	70941	Q9D5Q8
4930471M23Rik	RIKEN cDNA 4930471M23 gene	Mouse	DNA Binding	74919	Q8VE96
4930591A17Rik	RIKEN cDNA 4930591A17 gene	Mouse	DNA Binding	68175	Q9CQH6
4933409G03Rik	RIKEN cDNA 4933409G03 gene	Mouse	DNA Binding	227998	Q8C5U0
4933411K20Rik	RIKEN cDNA 4933411K20 gene	Mouse	DNA Binding	66756	Q6ZPR1
5033414D02Rik	RIKEN cDNA 5033414D02 gene	Mouse	DNA Binding	67759	Q9D3P8
5830403L16Rik	RIKEN cDNA 5830403L16 gene	Mouse	DNA Binding	240817	Q208S0
6430598A04Rik	RIKEN cDNA 6430598A04 gene	Mouse	DNA Binding	243300	Q6PFX7
6530418L21Rik	RIKEN cDNA 6530418L21 gene	Mouse	DNA Binding	109050	Q80VY2
9430020K01Rik	RIKEN cDNA 9430020K01 gene	Mouse	DNA Binding	240185	B7ZN02
9430023L20Rik	RIKEN cDNA 9430023L20 gene	Mouse	DNA Binding	68118	Q9D8Z6
9930021D14Rik	BRICHOS domain containing 5	Mouse	DNA Binding	319259	Q8BV89
A530053G22Rik	RIKEN cDNA A530053G22 gene	Mouse	DNA Binding	208079	N/A
A930005I04Rik	RIKEN cDNA A930005I04 gene	Mouse	DNA Binding	403174	Q8BIL2
Aasdhppt	aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	Mouse	DNA Binding	67618	Q9CQF6
Abca5	ATP-binding cassette, sub-family A (ABC1), member 5	Mouse	DNA Binding	217265	A2AEP4
Abhd1	abhydrolase domain containing 1	Mouse	DNA Binding	57742	Q9QZC8
Abhd11	abhydrolase domain containing 11	Mouse	DNA Binding	68758	D3YYK0
Abhd12	abhydrolase domain containing 12	Mouse	DNA Binding	76192	Q99LR1
Acbd4	acyl-Coenzyme A binding domain containing 4	Mouse	DNA Binding	67131	Q80X94
Accn5	amiloride-sensitive cation channel 5, intestinal	Mouse	DNA Binding	58170	Q9R0Y1
Ace	angiotensin I converting enzyme (peptidyl-dipeptidase A) 1	Mouse	DNA Binding	11421	A2A688
Acot10	acyl-CoA thioesterase 10	Mouse	DNA Binding	64833	Q32MW3
Actr3	ARP3 actin-related protein 3	Mouse	DNA Binding	74117	Q3ULF7
Acvrl1	activin A receptor, type II-like 1	Mouse	DNA Binding	11482	Q61288
Adamts8	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 8	Mouse	DNA Binding	30806	F8VQ15
Adora3	adenosine A3 receptor	Mouse	DNA Binding	11542	Q497R5
Aebp1	AE binding protein 1	Mouse	DNA Binding	11568	Q640N1
Aen	apoptosis enhancing nuclease	Mouse	DNA Binding	68048	Q9CZI9
AES	amino-terminal enhancer of split	Human	Protein Binding	166	Q08117
Afp	alpha fetoprotein	Mouse	DNA Binding	11576	P02772
Ahi1	Abelson helper integration site 1	Mouse	DNA Binding	52906	Q8K3E5
AI118078	expressed sequence AI118078	Mouse	DNA Binding	244886	B1B1B2
AI413582	expressed sequence AI413582	Mouse	DNA Binding	106672	Q3V2N7
AI597479	expressed sequence AI597479	Mouse	DNA Binding	98404	Q922M7
Aimp1	aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	Mouse	DNA Binding	13722	Q3UZG4
Alad	aminolevulinate, delta-, dehydratase	Mouse	DNA Binding	17025	P10518
Aldh1b1	aldehyde dehydrogenase 1 family, member B1	Mouse	DNA Binding	72535	B1AWX7
Aldh8a1	aldehyde dehydrogenase 8 family, member A1	Mouse	DNA Binding	237320	Q8BH00
Alg2	asparagine-linked glycosylation 2 (alpha-1,3-mannosyltransferase)	Mouse	DNA Binding	56737	Q9DBE8
Alk	anaplastic lymphoma kinase	Mouse	DNA Binding	11682	P97793
Alkbh2	alkB, alkylation repair homolog 2 (E. coli)	Mouse	DNA Binding	231642	Q6P6J4
Als2cr12	amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 (human)	Mouse	DNA Binding	108812	Q8BVM7
Amd1	S-adenosylmethionine decarboxylase 1	Mouse	DNA Binding	11702	P31154
Ampd2	adenosine monophosphate deaminase 2	Mouse	DNA Binding	109674	Q9DBT5
Ank1	ankyrin 1, erythroid	Mouse	DNA Binding	11733	Q02357
Ankk1	ankyrin 1, erythroid	Mouse	DNA Binding	11733	Q02357
Ankrd22	ankyrin repeat domain 22	Mouse	DNA Binding	52024	Q9D3J5
Ankrd7	ankyrin repeat domain 7	Mouse	DNA Binding	75196	Q9D504
Ano4	anoctamin 4	Mouse	DNA Binding	320091	D3Z1D8
Anxa10	annexin A10	Mouse	DNA Binding	26359	Q9QZ10
Aox4	aldehyde oxidase 4	Mouse	DNA Binding	71872	Q3TYQ9
Ap2a1	adaptor protein complex AP-2, alpha 1 subunit	Mouse	DNA Binding	11771	P17426
Apoa1	apolipoprotein A-I	Mouse	DNA Binding	11806	Q00623
Arhgap5	Rho GTPase activating protein 5	Mouse	DNA Binding	11855	E9PYT0
Arhgef38	Rho guanine nucleotide exchange factor (GEF) 38	Mouse	DNA Binding	77669	Q80VK6
Arid4b	AT rich interactive domain 4B (RBP1-like)	Mouse	DNA Binding	94246	A2CG63
Arid5a	AT rich interactive domain 5A (MRF1-like)	Mouse	DNA Binding	214855	Q3U108
Armcx2	armadillo repeat containing, X-linked 2	Mouse	DNA Binding	67416	Q6A058
Arntl	aryl hydrocarbon receptor nuclear translocator-like	Mouse	DNA Binding	11865	Q9WTL8
As3mt	arsenic (+3 oxidation state) methyltransferase	Mouse	DNA Binding	57344	Q91WU5
Asl	argininosuccinate lyase	Mouse	DNA Binding	109900	Q91YI0
Aspdh	aspartate dehydrogenase domain containing	Mouse	DNA Binding	68352	Q9DCQ2
Aspm	asp (abnormal spindle)-like, microcephaly associated (Drosophila)	Mouse	DNA Binding	12316	Q4G1G9
Atg2b	ATG2 autophagy related 2 homolog B (S. cerevisiae)	Mouse	DNA Binding	76559	Q80XK6
Atg4c	autophagy related 4C, cysteine peptidase	Mouse	DNA Binding	242557	Q3UYA5
Atg5	autophagy related 5	Mouse	DNA Binding	11793	Q99J83
Atl2	atlastin GTPase 2	Mouse	DNA Binding	56298	Q6PA06
Atp13a4	ATPase type 13A4	Mouse	DNA Binding	224079	E9QPP7
Atp5j	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F	Mouse	DNA Binding	11957	P97450
Atp6v0e	ATPase, H+ transporting, lysosomal V0 subunit E	Mouse	DNA Binding	11974	Q9CQD8
Atp7a	ATPase, Cu++ transporting, alpha polypeptide	Mouse	DNA Binding	11977	Q64430
Atrnl1	attractin like 1	Mouse	DNA Binding	226255	Q6A051
Atrx	alpha thalassemia/mental retardation syndrome X-linked homolog (human)	Mouse	DNA Binding	22589	Q61687
AU040320	expressed sequence AU040320	Mouse	DNA Binding	100317	Q8K135
Axdnd1	axonemal dynein light chain domain containing 1	Mouse	DNA Binding	77352	Q3UZ57
B3gnt7	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7	Mouse	DNA Binding	227327	Q8K0J2
B4galt1	UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1	Mouse	DNA Binding	14595	P15535
Bahd1	bromo adjacent homology domain containing 1	Mouse	DNA Binding	228536	Q497V6
Batf	basic leucine zipper transcription factor, ATF-like	Mouse	DNA Binding	53314	O35284
Bbs12	Bardet-Biedl syndrome 12 (human)	Mouse	DNA Binding	241950	Q5SUD9
BC003331	cDNA sequence BC003331	Mouse	DNA Binding	226499	Q4PJX1
BC005537	cDNA sequence BC005537	Mouse	DNA Binding	79555	Q3TVJ4
BC030476	cDNA sequence BC030476	Mouse	DNA Binding	239368	Q8K0S2
BC031181	cDNA sequence BC031181	Mouse	DNA Binding	407819	Q91WE4
BC094916	cDNA sequence BC094916	Mouse	DNA Binding	545384	Q504N7
Bhlhb5	basic helix-loop-helix family, member e22	Mouse	DNA Binding	59058	Q8C6A8
Bivm	basic, immunoglobulin-like variable motif containing	Mouse	DNA Binding	246229	Q8CBX9
Brd1	bromodomain containing 1	Mouse	DNA Binding	223770	A7MCW6
Brd2	bromodomain containing 2	Mouse	DNA Binding	14312	B2RS09
Brms1	breast cancer metastasis-suppressor 1	Mouse	DNA Binding	107392	Q547N0
Brs3	bombesin-like receptor 3	Mouse	DNA Binding	12209	B1AVC6
Btd	biotinidase	Mouse	DNA Binding	26363	Q8CIF4
Btg4	B cell translocation gene 4	Mouse	DNA Binding	56057	Q925T9
Btn1a1	butyrophilin, subfamily 1, member A1	Mouse	DNA Binding	12231	Q3UM26
C1ql3	C1q-like 3	Mouse	DNA Binding	227580	B0LXL6
C8b	complement component 8, beta polypeptide	Mouse	DNA Binding	110382	B1ASJ7
Cacna2d1	calcium channel, voltage-dependent, alpha2/delta subunit 1	Mouse	DNA Binding	12293	O08532
Cacng4	calcium channel, voltage-dependent, gamma subunit 4	Mouse	DNA Binding	54377	A2AAU2
Cadm3	cell adhesion molecule 3	Mouse	DNA Binding	94332	Q99N28
Calcr	calcitonin receptor	Mouse	DNA Binding	12311	Q3UUL9
Caln1	calneuron 1	Mouse	DNA Binding	140904	Q542R1
Calu	calumenin	Mouse	DNA Binding	12321	O35887
Car11	carbonic anhydrase 11	Mouse	DNA Binding	12348	O70354
Car3	carbonic anhydrase 3	Mouse	DNA Binding	12350	P16015
Casd1	CAS1 domain containing 1	Mouse	DNA Binding	213819	Q7TN73
Casq1	calsequestrin 1	Mouse	DNA Binding	12372	O09165
Catsperb	cation channel, sperm-associated, beta	Mouse	DNA Binding	271036	A2RTF1
Cav1	caveolin 1, caveolae protein	Mouse	DNA Binding	12389	P49817
Cblc	Casitas B-lineage lymphoma c	Mouse	DNA Binding	80794	G3X9U0
Cby1	chibby homolog 1 (Drosophila)	Mouse	DNA Binding	73739	Q9D1C2
Ccdc101	coiled-coil domain containing 101	Mouse	DNA Binding	75565	Q9DA08
Ccdc104	coiled-coil domain containing 104	Mouse	DNA Binding	216618	Q8C6E0
Ccdc106	coiled-coil domain containing 106	Mouse	DNA Binding	232821	Q3ULM0
Ccdc21	coiled-coil domain containing 21	Mouse	DNA Binding	70012	A2A9K2
Ccdc28a	coiled-coil domain containing 28A	Mouse	DNA Binding	215814	Q3UFK1
Ccdc32	coiled-coil domain containing 32	Mouse	DNA Binding	269336	Q3UHY7
Ccdc60	coiled-coil domain containing 60	Mouse	DNA Binding	269693	Q8C4J0
Cchcr1	coiled-coil alpha-helical rod protein 1	Mouse	DNA Binding	240084	Q3TWA2
Cckbr	cholecystokinin B receptor	Mouse	DNA Binding	12426	P56481
Ccl2	chemokine (C-C motif) ligand 2	Mouse	DNA Binding	20296	P10148
Ccr10	chemokine (C-C motif) receptor 10	Mouse	DNA Binding	12777	Q9JL21
Ccrl2	chemokine (C-C motif) receptor-like 2	Mouse	DNA Binding	54199	O35457
Cct6a	chaperonin containing Tcp1, subunit 6a (zeta)	Mouse	DNA Binding	12466	P80317
Cd177	CD177 antigen	Mouse	DNA Binding	68891	Q8R2S8
Cd274	CD274 antigen	Mouse	DNA Binding	60533	Q3U472
Cd2ap	CD2-associated protein	Mouse	DNA Binding	12488	Q9JLQ0
Cd84	CD84 antigen	Mouse	DNA Binding	12523	Q18PI6
Cdh2	cadherin 2	Mouse	DNA Binding	12558	P15116
Cdk17	cyclin-dependent kinase 17	Mouse	DNA Binding	237459	Q8K0D0
Cdkn1a	cyclin-dependent kinase inhibitor 1A (P21)	Mouse	DNA Binding	12575	P39689
Cdkn2aip	CDKN2A interacting protein	Mouse	DNA Binding	70925	Q8BI72
Cdkn2c	cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)	Mouse	DNA Binding	12580	B1ASP9
Ceacam9	carcinoembryonic antigen-related cell adhesion molecule 9	Mouse	DNA Binding	26368	Q78T27
Cenpc1	centromere protein C1	Mouse	DNA Binding	12617	P49452
Cep135	centrosomal protein 135	Mouse	DNA Binding	381644	Q6P5D4
Ces1g	carboxylesterase 1G	Mouse	DNA Binding	12623	Q3UW56
Cfh	complement component factor h	Mouse	DNA Binding	12628	E9Q8I0
Cggbp1	CGG triplet repeat binding protein 1	Mouse	DNA Binding	106143	A6X966
Chchd6	coiled-coil-helix-coiled-coil-helix domain containing 6	Mouse	DNA Binding	66098	E9Q4M4
Chga	chromogranin A	Mouse	DNA Binding	12652	P26339
Chmp1b	charged multivesicular body protein 1B	Mouse	DNA Binding	67064	Q99LU0
Chn1	chimerin (chimaerin) 1	Mouse	DNA Binding	108699	Q91V57
Chrng	cholinergic receptor, nicotinic, gamma polypeptide	Mouse	DNA Binding	11449	F8VQK4
Chtf18	CTF18, chromosome transmission fidelity factor 18	Mouse	DNA Binding	214901	Q8BIW9
Clca6	chloride channel calcium activated 6	Mouse	DNA Binding	99663	G3X8Z1
Clec1b	C-type lectin domain family 1, member b	Mouse	DNA Binding	56760	Q9JL99
Clec9a	C-type lectin domain family 9, member a	Mouse	DNA Binding	232414	Q8BRU4
Cma1	chymase 1, mast cell	Mouse	DNA Binding	17228	A4QPC5
Cnn2	calponin 2	Mouse	DNA Binding	12798	Q08093
Cntn1	contactin 1	Mouse	DNA Binding	12805	P12960
Col10a1	collagen, type X, alpha 1	Mouse	DNA Binding	12813	Q05306
Col6a2	collagen, type VI, alpha 2	Mouse	DNA Binding	12834	Q02788
Cotl1	coactosin-like 1 (Dictyostelium)	Mouse	DNA Binding	72042	Q544F6
Cox17	cytochrome c oxidase, subunit XVII assembly protein homolog (yeast)	Mouse	DNA Binding	12856	P56394
Cox7a2l	cytochrome c oxidase subunit VIIa polypeptide 2-like	Mouse	DNA Binding	20463	E9PZS8
Cox7b2	cytochrome c oxidase subunit VIIb2	Mouse	DNA Binding	78174	Q9D2H1
Cox8b	cytochrome c oxidase, subunit VIIIb	Mouse	DNA Binding	12869	P48772
Cpeb1	cytoplasmic polyadenylation element binding protein 1	Mouse	DNA Binding	12877	P70166
Cpne2	copine II	Mouse	DNA Binding	234577	P59108
Cpsf1	cleavage and polyadenylation specific factor 1	Mouse	DNA Binding	94230	Q9EPU4
Crb1	crumbs homolog 1 (Drosophila)	Mouse	DNA Binding	170788	Q8VHS2
Creb3l1	cAMP responsive element binding protein 3-like 1	Mouse	DNA Binding	26427	Q9Z125
Crtac1	cartilage acidic protein 1	Mouse	DNA Binding	72832	Q8R555
Cry2	cryptochrome 2 (photolyase-like)	Mouse	DNA Binding	12953	Q9R194
Cryge	crystallin, gamma E	Mouse	DNA Binding	12968	Q03740
Csn1s1	casein alpha s1	Mouse	DNA Binding	12990	P19228
Cst13	cystatin 13	Mouse	DNA Binding	69294	A2APW3
Cst7	cystatin F (leukocystatin)	Mouse	DNA Binding	13011	O89098
Cstf2t	cleavage stimulation factor, 3' pre-RNA subunit 2, tau	Mouse	DNA Binding	83410	Q8C7E9
Ctnna2	catenin (cadherin associated protein), alpha 2	Mouse	DNA Binding	12386	Q61301
Ctr9	Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	Mouse	DNA Binding	22083	Q05CJ7
Cuedc2	CUE domain containing 2	Mouse	DNA Binding	67116	Q9CXX9
Cwc22	CWC22 spliceosome-associated protein homolog (S. cerevisiae)	Mouse	DNA Binding	80744	B1AYU5
cwh43	cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)	Mouse	DNA Binding	231293	Q91YL7
Cxcl10	chemokine (C-X-C motif) ligand 10	Mouse	DNA Binding	15945	P17515
Cxcl11	chemokine (C-X-C motif) ligand 11	Mouse	DNA Binding	56066	Q9JHH5
Cxcr2	chemokine (C-X-C motif) receptor 2	Mouse	DNA Binding	12765	P35343
Cxcr7	chemokine (C-X-C motif) receptor 7	Mouse	DNA Binding	12778	P56485
Cxxc4	CXXC finger 4	Mouse	DNA Binding	319478	Q6NXI8
Cxxc5	CXXC finger 5	Mouse	DNA Binding	67393	Q91WA4
Cyb5r4	cytochrome b5 reductase 4	Mouse	DNA Binding	266690	Q3TDX8
Cybb	cytochrome b-245, beta polypeptide	Mouse	DNA Binding	13058	Q3U6G0
Cyp1b1	cytochrome P450, family 1, subfamily b, polypeptide 1	Mouse	DNA Binding	13078	Q64429
Cyp26b1	cytochrome P450, family 26, subfamily b, polypeptide 1	Mouse	DNA Binding	232174	Q811W2
Cyp2b10	cytochrome P450, family 2, subfamily b, polypeptide 10	Mouse	DNA Binding	13088	Q9WUD0
Cyp2c55	cytochrome P450, family 2, subfamily c, polypeptide 55	Mouse	DNA Binding	72082	Q9D816
Cyp2c66	cytochrome P450, family 2, subfamily c, polypeptide 66	Mouse	DNA Binding	69888	Q5GLZ0
Cyp2r1	cytochrome P450, family 2, subfamily r, polypeptide 1	Mouse	DNA Binding	244209	Q32MW1
CYTIP	cytohesin 1 interacting protein	Human	Protein Binding	9595	O60759
D10Jhu81e	DNA segment, Chr 10, Johns Hopkins University 81 expressed	Mouse	DNA Binding	28295	Q9D172
D19Ertd737e	DNA segment, Chr 19, ERATO Doi 737, expressed	Mouse	DNA Binding	76539	Q8C6C7
Dbndd2	dysbindin (dystrobrevin binding protein 1) domain containing 2	Mouse	DNA Binding	52840	Q330P7
Dbnl	Drebrin-like	Mouse	DNA Binding	13169	Q62418
Dcaf13	DDB1 and CUL4 associated factor 13	Mouse	DNA Binding	223499	Q6PAC3
Dcun1d1	DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)	Mouse	DNA Binding	114893	Q9QZ73
Ddit4	DNA-damage-inducible transcript 4	Mouse	DNA Binding	74747	B7ZNP9
Defb2	defensin beta 2	Mouse	DNA Binding	13215	P82020
Defb29	defensin beta 29	Mouse	DNA Binding	75400	A3KGR0
Defb50	defensin beta 50	Mouse	DNA Binding	387334	Q6TU36
Depdc6	DEP domain containing MTOR-interacting protein	Mouse	DNA Binding	97998	B2ZRS7
Derl3	Der1-like domain family, member 3	Mouse	DNA Binding	70377	Q14C34
Dgkz	diacylglycerol kinase zeta	Mouse	DNA Binding	104418	Q80UP3
Dhx37	DEAH (Asp-Glu-Ala-His) box polypeptide 37	Mouse	DNA Binding	208144	Q6NZL1
Dip2b	DIP2 disco-interacting protein 2 homolog B (Drosophila)	Mouse	DNA Binding	239667	Q3UH60
Dmp1	dentin matrix protein 1	Mouse	DNA Binding	13406	O55188
Dmrt3	doublesex and mab-3 related transcription factor 3	Mouse	DNA Binding	240590	Q80WT2
Dmrta2	doublesex and mab-3 related transcription factor like family A2	Mouse	DNA Binding	242620	A2A9A2
Dmrtc1a	DMRT-like family C1a	Mouse	DNA Binding	70887	B1AX34
DNM2	dynamin 2	Human	Protein Binding	1785	P50570
Doc2b	double C2, beta	Mouse	DNA Binding	13447	P70169
Dok6	docking protein 6	Mouse	DNA Binding	623279	Q2MHE5
Dpm2	dolichol-phosphate (beta-D) mannosyltransferase 2	Mouse	DNA Binding	13481	Q545R7
Dppa3	developmental pluripotency-associated 3	Mouse	DNA Binding	73708	Q8QZY3
Dpyd	dihydropyrimidine dehydrogenase	Mouse	DNA Binding	99586	Q8CHR6
Dpys	dihydropyrimidinase	Mouse	DNA Binding	64705	Q9EQF5
Drap1	Dr1 associated protein 1 (negative cofactor 2 alpha)	Mouse	DNA Binding	66556	Q4FJW2
Dusp11	dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	Mouse	DNA Binding	72102	Q6NXK5
Dusp19	dual specificity phosphatase 19	Mouse	DNA Binding	68082	Q99N12
Ebf3	early B-cell factor 3	Mouse	DNA Binding	13593	O08791
Eda	ectodysplasin-A	Mouse	DNA Binding	13607	O54693
Eda2r	ectodysplasin A2 receptor	Mouse	DNA Binding	245527	Q8BX35
Ednra	endothelin receptor type A	Mouse	DNA Binding	13617	Q61614
Efcab8	EF-hand calcium binding domain 8	Mouse	DNA Binding	329541	Q8C9R9
Efnb3	ephrin B3	Mouse	DNA Binding	13643	O35393
Efs	embryonal Fyn-associated substrate	Mouse	DNA Binding	13644	Q64355
Egfl6	EGF-like-domain, multiple 6	Mouse	DNA Binding	54156	Q9JJZ5
Eif2ak3	eukaryotic translation initiation factor 2 alpha kinase 3	Mouse	DNA Binding	13666	E9QQ30
Eif4a2	eukaryotic translation initiation factor 4A2	Mouse	DNA Binding	13682	E9Q561
Eif5	eukaryotic translation initiation factor 5	Mouse	DNA Binding	217869	P59325
Emc7	ER membrane protein complex subunit 7	Mouse	DNA Binding	73024	Q14C26
Endog	endonuclease G	Mouse	DNA Binding	13804	O08600
Enpp4	ectonucleotide pyrophosphatase/phosphodiesterase 4	Mouse	DNA Binding	224794	B8JJY5
Eomes	eomesodermin homolog (Xenopus laevis)	Mouse	DNA Binding	13813	O54839
Epb4.1l1	erythrocyte protein band 4.1-like 1	Mouse	DNA Binding	13821	Q8C8P2
Epgn	epithelial mitogen	Mouse	DNA Binding	71920	Q0VEB7
Epha3	Eph receptor A3	Mouse	DNA Binding	13837	Q8BRB1
Ephb1	Eph receptor B1	Mouse	DNA Binding	270190	Q8CA63
Ephx2	epoxide hydrolase 2, cytoplasmic	Mouse	DNA Binding	13850	P34914
Epyc	epiphycan	Mouse	DNA Binding	13516	P70186
Ermn	ermin, ERM-like protein	Mouse	DNA Binding	77767	Q5EBJ4
Esam1	endothelial cell-specific adhesion molecule	Mouse	DNA Binding	69524	Q3U102
Espn	espin	Mouse	DNA Binding	56226	Q9DD12
Esx1	extraembryonic, spermatogenesis, homeobox 1	Mouse	DNA Binding	13984	O88933
Esyt3	extended synaptotagmin-like protein 3	Mouse	DNA Binding	272636	Q5DTI8
Ets2	E26 avian leukemia oncogene 2, 3' domain	Mouse	DNA Binding	23872	P15037
Evx2	even skipped homeotic gene 2 homolog	Mouse	DNA Binding	14029	A2ASM4
Exosc4	exosome component 4	Mouse	DNA Binding	109075	Q542B0
Fa2h	fatty acid 2-hydroxylase	Mouse	DNA Binding	338521	Q5MPP0
Fam107b	family with sequence similarity 107, member B	Mouse	DNA Binding	66540	Q3TGF2
Fam124b	family with sequence similarity 124, member B	Mouse	DNA Binding	241128	Q8BLQ0
Fam160a1	family with sequence similarity 160, member A1	Mouse	DNA Binding	229488	Q505K2
Fam26f	family with sequence similarity 26, member F	Mouse	DNA Binding	215900	Q8C9E8
Fam45A	family with sequence similarity 45, member A	Mouse	DNA Binding	67894	Q9D8N2
Fam50a	family with sequence similarity 50, member A	Mouse	DNA Binding	108160	Q9WV03
Fam53b	family with sequence similarity 53, member B	Mouse	DNA Binding	77938	Q8BGR5
Fam83g	family with sequence similarity 83, member G	Mouse	DNA Binding	69640	Q5SWY7
Fap	fibroblast activation protein	Mouse	DNA Binding	14089	A2AS87
Fbf1	Fas (TNFRSF6) binding factor 1	Mouse	DNA Binding	217335	A2A870
Fbxo15	F-box protein 15	Mouse	DNA Binding	50764	Q3TJW2
Fbxo40	F-box protein 40	Mouse	DNA Binding	207215	P62932
Fbxw4	F-box and WD-40 domain protein 4	Mouse	DNA Binding	30838	Q9JMJ2
Fcamr	Fc receptor, IgA, IgM, high affinity	Mouse	DNA Binding	64435	Q2TB54
Fcna	ficolin A	Mouse	DNA Binding	14133	O70165
Fert2	fer (fms/fps related) protein kinase, testis specific 2	Mouse	DNA Binding	14158	P70451
Fev	FEV (ETS oncogene family)	Mouse	DNA Binding	260298	Q8QZW2
Fgf20	fibroblast growth factor 20	Mouse	DNA Binding	80857	Q9ESL9
Fgf4	fibroblast growth factor 4	Mouse	DNA Binding	14175	P11403
Fgfbp3	fibroblast growth factor binding protein 3	Mouse	DNA Binding	72514	Q1HCM0
Fgfr1op2	FGFR1 oncogene partner 2	Mouse	DNA Binding	67529	Q9CRA9
Fgfr2	fibroblast growth factor receptor 2	Mouse	DNA Binding	14183	E9QK53
Fgr	Gardner-Rasheed feline sarcoma viral (Fgr) oncogene homolog	Mouse	DNA Binding	14191	P14234
Fhad1	forkhead-associated (FHA) phosphopeptide binding domain 1	Mouse	DNA Binding	329977	A6PWD2
Fibcd1	fibrinogen C domain containing 1	Mouse	DNA Binding	98970	A2AV25
Fignl1	fidgetin-like 1	Mouse	DNA Binding	60530	Q8BPY9
Fmnl1	formin-like 1	Mouse	DNA Binding	57778	A2AB61
Fnip1	folliculin interacting protein 1	Mouse	DNA Binding	216742	Q68FD7
Fosb	FBJ osteosarcoma oncogene B	Mouse	DNA Binding	14282	A2RSD4
Foxa1	forkhead box A1	Mouse	DNA Binding	15375	P35582
Foxb2	forkhead box B2	Mouse	DNA Binding	14240	B9EII5
Foxf1a	forkhead box F1	Mouse	DNA Binding	15227	Q61080
Foxn4	forkhead box N4	Mouse	DNA Binding	116810	Q8K3Q3
Frem2	Fras1 related extracellular matrix protein 2	Mouse	DNA Binding	242022	Q6NVD0
Fryl	furry homolog-like (Drosophila)	Mouse	DNA Binding	72313	F8VQ05
Fut7	fucosyltransferase 7	Mouse	DNA Binding	14347	E2D0W5
Fxyd6	FXYD domain-containing ion transport regulator 6	Mouse	DNA Binding	59095	Q9D164
Gab3	growth factor receptor bound protein 2-associated protein 3	Mouse	DNA Binding	210710	Q8BSM5
Gabrb3	gamma-aminobutyric acid (GABA) A receptor, subunit beta 3	Mouse	DNA Binding	14402	P63080
Gabre	gamma-aminobutyric acid (GABA) A receptor, subunit epsilon	Mouse	DNA Binding	14404	A2AMW3
Gad2	glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)	Mouse	DNA Binding	14417	P48320
Galnt14	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14	Mouse	DNA Binding	71685	Q08EC9
Galntl6	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6	Mouse	DNA Binding	270049	E5D8G1
Gapdhs	glyceraldehyde-3-phosphate dehydrogenase, spermatogenic	Mouse	DNA Binding	14447	Q64467
Gata3	GATA binding protein 3	Mouse	DNA Binding	14462	P23772
Gbp6	guanylate binding protein 7	Mouse	DNA Binding	229900	Q91Z40
Gdf1	growth differentiation factor 1	Mouse	DNA Binding	14559	A2RT05
Gfi1b	growth factor independent 1B	Mouse	DNA Binding	14582	B7ZNH2
Ggcx	gamma-glutamyl carboxylase	Mouse	DNA Binding	56316	B2RS80
Ghdc	GH3 domain containing	Mouse	DNA Binding	80860	Q99J23
Ghrh	growth hormone releasing hormone	Mouse	DNA Binding	14601	P16043
Gimap8	GTPase, IMAP family member 8	Mouse	DNA Binding	243374	Q75N62
Gjb2	gap junction protein, beta 2	Mouse	DNA Binding	14619	Q00977
Gjd4	gap junction protein, delta 4	Mouse	DNA Binding	225152	Q8BSD4
Glra3	glycine receptor, alpha 3 subunit	Mouse	DNA Binding	110304	G5E811
Glt25d2	glycosyltransferase 25 domain containing 2	Mouse	DNA Binding	269132	Q6NVG7
Gm1673	predicted gene 1673	Mouse	DNA Binding	381633	Q3UR78
Gm382	predicted gene 382	Mouse	DNA Binding	211208	B1AXN3
Gm4793	predicted gene 4793	Mouse	DNA Binding	215714	N/A
Gm4861	predicted gene 4861	Mouse	DNA Binding	229862	Q8C5A4
Gm5094	predicted gene 5094	Mouse	DNA Binding	328839	N/A
Gm5635	predicted gene 5635	Mouse	DNA Binding	434729	Q3SXD2
Gm6377	predicted gene 6377	Mouse	DNA Binding	622976	Q8BHV4
Gm711	predicted gene 711	Mouse	DNA Binding	279029	Q80YS9
Gm784	fibronectin type III domain containing 3C1	Mouse	DNA Binding	333564	Q6DFV6
Gm973	predicted gene 973	Mouse	DNA Binding	381260	E9Q295
Gm996	predicted gene 996	Mouse	DNA Binding	381353	A2AJA9
Gmds	GDP-mannose 4, 6-dehydratase	Mouse	DNA Binding	218138	Q8K0C9
Gnai1	guanine nucleotide binding protein (G protein), alpha inhibiting 1	Mouse	DNA Binding	14677	B2RSH2
Gnao1	guanine nucleotide binding protein, alpha O	Mouse	DNA Binding	14681	P18872
Gng11	guanine nucleotide binding protein (G protein), gamma 11	Mouse	DNA Binding	66066	P61953
Gng13	guanine nucleotide binding protein (G protein), gamma 13	Mouse	DNA Binding	64337	Q9JMF3
Gnl2	guanine nucleotide binding protein-like 2 (nucleolar)	Mouse	DNA Binding	230737	Q3V3N5
Gnmt	glycine N-methyltransferase	Mouse	DNA Binding	14711	A9C489
Gpatch2	G patch domain containing 2	Mouse	DNA Binding	67769	Q7TQC7
Gpd1	glycerol-3-phosphate dehydrogenase 1 (soluble)	Mouse	DNA Binding	14555	P13707
Gpr21	G protein-coupled receptor 21	Mouse	DNA Binding	338346	Q8BX79
Gpr26	G protein-coupled receptor 26	Mouse	DNA Binding	233919	Q0VBG4
Gpr37	G protein-coupled receptor 37	Mouse	DNA Binding	14763	Q9QY42
Gpr50	G-protein-coupled receptor 50	Mouse	DNA Binding	14765	O88495
Gpsm1	G-protein signalling modulator 1 (AGS3-like, C. elegans)	Mouse	DNA Binding	67839	Q6IR34
Gria1	glutamate receptor, ionotropic, AMPA1 (alpha 1)	Mouse	DNA Binding	14799	P23818
Gria3	glutamate receptor, ionotropic, AMPA3 (alpha 3)	Mouse	DNA Binding	53623	A2VDF5
Grm1	glutamate receptor, metabotropic 1	Mouse	DNA Binding	14816	P97772
Gss	glutathione synthetase	Mouse	DNA Binding	14854	P51855
Gstk1	glutathione S-transferase kappa 1	Mouse	DNA Binding	76263	Q9DCM2
Gtf2b	general transcription factor IIB	Mouse	DNA Binding	229906	P62915
Gtlf3b	predicted gene, Gm16515	Mouse	DNA Binding	24083	Q9DBW3
Gvin1	GTPase, very large interferon inducible 1	Mouse	DNA Binding	74558	Q80SU7
H2-Q8	histocompatibility 2, Q region locus 8	Mouse	DNA Binding	15019	P79567
Hao1	hydroxyacid oxidase 1, liver	Mouse	DNA Binding	15112	Q3UEE8
Haus3	HAUS augmin-like complex, subunit 3	Mouse	DNA Binding	231123	Q8QZX2
Haus5	HAUS augmin-like complex, subunit 5	Mouse	DNA Binding	71909	Q9D786
Hbp1	high mobility group box transcription factor 1	Mouse	DNA Binding	73389	E9Q1A8
Hc	hemolytic complement	Mouse	DNA Binding	15139	P06684
Hcrtr1	hypocretin (orexin) receptor 1	Mouse	DNA Binding	230777	P58307
Hdgfl1	hepatoma derived growth factor-like 1	Mouse	DNA Binding	15192	Q2VPR5
Hepacam2	HEPACAM family member 2	Mouse	DNA Binding	101202	Q4VAH7
Heph	hephaestin	Mouse	DNA Binding	15203	Q9Z0Z4
Hist1h2bc	histone cluster 1, H2bc	Mouse	DNA Binding	68024	Q6ZWY9
Hist1h4h	histone cluster 1, H4h	Mouse	DNA Binding	69386	P62806
Hist2h3c1	histone cluster 2, H3c1	Mouse	DNA Binding	15077	P84228
Hivep1	human immunodeficiency virus type I enhancer binding protein 1	Mouse	DNA Binding	110521	Q03172
Hmcn1	hemicentin 1	Mouse	DNA Binding	545370	D3YXG0
Hmgb3	high mobility group box 3	Mouse	DNA Binding	15354	O54879
Hmgn3	high mobility group nucleosomal binding domain 3	Mouse	DNA Binding	94353	Q9DCB1
Hnrpf	heterogeneous nuclear ribonucleoprotein F	Mouse	DNA Binding	98758	Q9Z2X1
Hpn	hepsin	Mouse	DNA Binding	15451	O35453
Hps5	Hermansky-Pudlak syndrome 5 homolog (human)	Mouse	DNA Binding	246694	P59438
Hr	hairless	Mouse	DNA Binding	15460	Q61645
Hs3st1	heparan sulfate (glucosamine) 3-O-sulfotransferase 1	Mouse	DNA Binding	15476	O35310
Hs3st3a1	heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1	Mouse	DNA Binding	15478	Q52KJ0
Hsf2	heat shock factor 2	Mouse	DNA Binding	15500	P38533
Hspa4l	heat shock protein 4 like	Mouse	DNA Binding	18415	P48722
Hspb3	heat shock protein 3	Mouse	DNA Binding	56534	Q9QZ57
Htatip2	HIV-1 tat interactive protein 2, homolog (human)	Mouse	DNA Binding	53415	Q9Z2G9
Htr7	5-hydroxytryptamine (serotonin) receptor 7	Mouse	DNA Binding	15566	P32304
Hyal1	hyaluronoglucosaminidase 1	Mouse	DNA Binding	15586	Q91ZJ9
Id2	inhibitor of DNA binding 2	Mouse	DNA Binding	15902	P41136
Ido1	indoleamine 2,3-dioxygenase 1	Mouse	DNA Binding	15930	P28776
Ifna1	interferon alpha 1	Mouse	DNA Binding	15962	P01572
Ifna9	interferon alpha 9	Mouse	DNA Binding	15972	B1AWY7
Ifnb1	interferon beta 1, fibroblast	Mouse	DNA Binding	15977	P01575
Ift46	intraflagellar transport 46	Mouse	DNA Binding	76568	Q9DB07
Igf1	insulin-like growth factor 1	Mouse	DNA Binding	16000	E9PU89
Igsf21	immunoglobulin superfamily, member 21	Mouse	DNA Binding	230868	Q7TNR6
Il18rap	interleukin 18 receptor accessory protein	Mouse	DNA Binding	16174	Q0VBK3
Il1f5	interleukin 1 family, member 5 (delta)	Mouse	DNA Binding	54450	A2AIA9
Inpp5k	inositol polyphosphate 5-phosphatase K	Mouse	DNA Binding	19062	Q5ND43
Ipo13	importin 13	Mouse	Protein Binding	230673	Q8K0C1
Ipo4	importin 4	Mouse	Protein Binding	75751	Q8VI75
Ipo9	importin 9	Mouse	Protein Binding	226432	Q91YE6
Iqub	IQ motif and ubiquitin domain containing	Mouse	DNA Binding	214704	Q8CDK3
Irs1	insulin receptor substrate 1	Mouse	DNA Binding	16367	P35569
ISL1	ISL LIM homeobox 1	Human	DNA Binding	3670	P61371
Itgav	integrin alpha V	Mouse	DNA Binding	16410	P43406
Itgb1bp1	integrin beta 1 binding protein 1	Mouse	DNA Binding	16413	O35671
Itgb3bp	integrin beta 3 binding protein (beta3-endonexin)	Mouse	DNA Binding	67733	B1AZQ7
Itm2c	integral membrane protein 2C	Mouse	DNA Binding	64294	Q91VK4
Iws1	IWS1 homolog (S. cerevisiae)	Mouse	DNA Binding	73473	Q8C1D8
Izumo1	izumo sperm-egg fusion 1	Mouse	DNA Binding	73456	Q9D9J7
Jph4	junctophilin 4	Mouse	DNA Binding	319984	Q80WT0
Kank3	KN motif and ankyrin repeat domains 3	Mouse	DNA Binding	80880	Q9Z1P7
Kansl3	KAT8 regulatory NSL complex subunit 3	Mouse	DNA Binding	226976	A2RSY1
Kbtbd8	kelch repeat and BTB (POZ) domain containing 8	Mouse	DNA Binding	243574	Q3UQV5
Kcna5	potassium voltage-gated channel, shaker-related subfamily, member 5	Mouse	DNA Binding	16493	Q61762
Kcnab1	potassium voltage-gated channel, shaker-related subfamily, beta member 1	Mouse	DNA Binding	16497	P63143
Kcnab3	potassium voltage-gated channel, shaker-related subfamily, beta member 3	Mouse	DNA Binding	16499	Q8C439
Kcne3	potassium voltage-gated channel, Isk-related subfamily, gene 3	Mouse	DNA Binding	57442	Q545H9
Kcnj14	potassium inwardly-rectifying channel, subfamily J, member 14	Mouse	DNA Binding	211480	Q8JZN3
Kcnt1	potassium channel, subfamily T, member 1	Mouse	DNA Binding	227632	Q6ZPR4
Kctd19	potassium channel tetramerisation domain containing 19	Mouse	DNA Binding	279499	Q562E2
Kctd4	potassium channel tetramerisation domain containing 4	Mouse	DNA Binding	67516	Q9D7X1
Kctd5	potassium channel tetramerisation domain containing 5	Mouse	DNA Binding	69259	Q8VC57
Khdrbs2	KH domain containing, RNA binding, signal transduction associated 2	Mouse	DNA Binding	170771	Q9WU01
Kif26b	kinesin family member 26B	Mouse	DNA Binding	269152	B0G0X9
Kirrel3	kin of IRRE like 3 (Drosophila)	Mouse	DNA Binding	67703	Q8BR86
Kl	klotho	Mouse	DNA Binding	16591	O35082
Klf10	Kruppel-like factor 10	Mouse	DNA Binding	21847	O89091
Klf13	Kruppel-like factor 13	Mouse	DNA Binding	50794	Q9JJZ6
Klf9	Kruppel-like factor 9	Mouse	DNA Binding	16601	Q8CEC4
Klhl15	kelch-like 15 (Drosophila)	Mouse	DNA Binding	236904	Q3TEP6
Klhl22	kelch-like 22 (Drosophila)	Mouse	DNA Binding	224023	Q99JN2
Klk1b11	kallikrein 1-related peptidase b11	Mouse	DNA Binding	16613	P15946
Klrc1	killer cell lectin-like receptor subfamily C, member 1	Mouse	DNA Binding	16641	Q9Z202
Krcc1	lysine-rich coiled-coil 1	Mouse	DNA Binding	57896	Q99JT5
Krt222	keratin 222	Mouse	DNA Binding	268481	Q8CCX5
Krt40	keratin 40	Mouse	DNA Binding	406221	Q6IFX3
Krt78	keratin 78	Mouse	DNA Binding	332131	E9Q0F0
Krtap6-2	keratin associated protein 6-2	Mouse	DNA Binding	16701	O08884
Ksr2	kinase suppressor of ras 2	Mouse	DNA Binding	333050	Q3UVC0
Lamc2	laminin, gamma 2	Mouse	DNA Binding	16782	G5E874
Lamtor3	late endosomal/lysosomal adaptor, MAPK and MTOR activator 3	Mouse	DNA Binding	56692	O88653
Lbxcor1	SKI family transcriptional corepressor 1	Mouse	DNA Binding	207667	Q8BX46
Lce1e	late cornified envelope 1E	Mouse	DNA Binding	68694	Q9D139
Lcn12	lipocalin 12	Mouse	DNA Binding	77701	Q2TA58
Lenep	lens epithelial protein	Mouse	DNA Binding	57275	Q543C4
Lgi1	leucine-rich repeat LGI family, member 1	Mouse	DNA Binding	56839	Q9JIA1
Lhx5	LIM homeobox protein 5	Mouse	DNA Binding	16873	P61375
Lhx6	LIM/homeobox protein Lhx6	Mouse	Protein Binding	16874	Q9R1R0
Limch1	LIM and calponin homology domains 1	Mouse	DNA Binding	77569	Q3UH68
Lingo1	leucine rich repeat and Ig domain containing 1	Mouse	DNA Binding	235402	Q9D1T0
Lmnb2	lamin B2	Mouse	DNA Binding	16907	P21619
Lmo1	LIM domain only 1	Mouse	DNA Binding	109594	Q924W9
Lmo3	LIM domain only 3	Mouse	DNA Binding	109593	Q8BZL8
Lmo4	LIM domain only 4	Mouse	DNA Binding	16911	P61969
Lnp	limb and neural patterns	Mouse	DNA Binding	69605	A2ASL8
Lpar4	lysophosphatidic acid receptor 4	Mouse	DNA Binding	78134	Q8BLG2
Lpp	LIM domain containing preferred translocation partner in lipoma	Mouse	DNA Binding	210126	Q8BFW7
Lrrc18	leucine rich repeat containing 18	Mouse	DNA Binding	67580	Q9CQ07
Lrrc26	leucine rich repeat containing 26	Mouse	DNA Binding	227618	Q91W20
Lrrc3	leucine rich repeat containing 3	Mouse	DNA Binding	237387	P59034
Lrrc49	leucine rich repeat containing 49	Mouse	DNA Binding	102747	G5E8R5
Lrrc8a	leucine rich repeat containing 8A	Mouse	DNA Binding	241296	Q80WG5
Lrrc8d	leucine rich repeat containing 8D	Mouse	DNA Binding	231549	Q8BGR2
Lrrd1	leucine rich repeats and death domain containing 1	Mouse	DNA Binding	242838	Q8C0R9
Lrrtm2	leucine rich repeat transmembrane neuronal 2	Mouse	DNA Binding	107065	Q8BGA3
Lsm5	LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	Mouse	DNA Binding	66373	P62322
Maf	avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog	Mouse	DNA Binding	17132	P54843
Mafa	v-maf musculoaponeurotic fibrosarcoma oncogene family, protein A (avian)	Mouse	DNA Binding	378435	Q8CF90
Mamdc2	MAM domain containing 2	Mouse	DNA Binding	71738	Q8CG85
Man1a2	mannosidase, alpha, class 1A, member 2	Mouse	DNA Binding	17156	A2A724
Manea	mannosidase, endo-alpha	Mouse	DNA Binding	242362	Q6NXH2
Mark3	MAP/microtubule affinity-regulating kinase 3	Mouse	DNA Binding	17169	Q03141
Mark4	MAP/microtubule affinity-regulating kinase 4	Mouse	DNA Binding	232944	Q8CIP4
Mbd3l2	methyl-CpG binding domain protein 3-like 2	Mouse	DNA Binding	234988	Q3UXB0
Mbip	MAP3K12 binding inhibitory protein 1	Mouse	DNA Binding	217588	Q99LQ1
Mboat1	membrane bound O-acyltransferase domain containing 1	Mouse	DNA Binding	218121	Q8BH98
Mc2r	melanocortin 2 receptor	Mouse	DNA Binding	17200	Q544P9
Mcm4	minichromosome maintenance deficient 4 homolog (S. cerevisiae)	Mouse	DNA Binding	17217	P49717
Mdfi	MyoD family inhibitor	Mouse	DNA Binding	17240	P70331
Me3	malic enzyme 3, NADP(+)-dependent, mitochondrial	Mouse	DNA Binding	109264	Q8BMF3
Meg3	maternally expressed 3 (non-protein coding)	Mouse	DNA Binding	17263	Q8CCV7
Meis1	Meis homeobox 1	Mouse	DNA Binding	17268	Q60954
Mep1a	meprin 1 alpha	Mouse	DNA Binding	17287	P28825
Mesdc2	mesoderm development candidate 2	Mouse	DNA Binding	67943	Q9ERE7
Mett10d	methyltransferase like 16	Mouse	DNA Binding	67493	Q9CQG2
Mett5d1	methyltransferase like 15	Mouse	DNA Binding	76894	Q9DCL4
Mfsd12	major facilitator superfamily domain containing 12	Mouse	DNA Binding	73822	Q3U481
Mid2	midline 2	Mouse	DNA Binding	23947	B1AVF4
Miox	myo-inositol oxygenase	Mouse	DNA Binding	56727	Q9QXN5
Mlip	muscular LMNA-interacting protein	Mouse	DNA Binding	69642	Q5FW52
Mlxip	MLX interacting protein	Mouse	DNA Binding	208104	G5E8D8
Mmp9	matrix metallopeptidase 9	Mouse	DNA Binding	17395	P41245
Mnat1	menage a trois 1	Mouse	DNA Binding	17420	P51949
Mpv17	MpV17 mitochondrial inner membrane protein	Mouse	DNA Binding	17527	P19258
Mro	maestro	Mouse	DNA Binding	71263	E9PUF9
Mrpl27	mitochondrial ribosomal protein L27	Mouse	DNA Binding	94064	Q5SUY2
Mrps22	mitochondrial ribosomal protein S22	Mouse	DNA Binding	64655	Q9CXW2
Msx2	homeobox, msh-like 2	Mouse	DNA Binding	17702	Q03358
Msx3	homeobox, msh-like 3	Mouse	DNA Binding	17703	B2RPS3
Mtap1b	microtubule-associated protein 1B	Mouse	DNA Binding	17755	P14873
Mtap4	microtubule-associated protein 4	Mouse	DNA Binding	17758	P27546
Mtch2	mitochondrial carrier homolog 2 (C. elegans)	Mouse	DNA Binding	56428	Q791V5
Mterfd1	MTERF domain containing 1	Mouse	DNA Binding	66410	Q8R3J4
Mtrf1l	mitochondrial translational release factor 1-like	Mouse	DNA Binding	108853	Q8BJU9
Muc4	mucin 4	Mouse	DNA Binding	140474	E9Q7Q0
Musk	muscle, skeletal, receptor tyrosine kinase	Mouse	DNA Binding	18198	Q61006
Mvd	mevalonate (diphospho) decarboxylase	Mouse	DNA Binding	192156	Q3UYC1
Mx2	myxovirus (influenza virus) resistance 2	Mouse	DNA Binding	17858	Q9WVP9
Mycbp	c-myc binding protein	Mouse	DNA Binding	56309	Q8R048
Mycbp2	MYC binding protein 2	Mouse	DNA Binding	105689	Q7TPH6
Myf5	myogenic factor 5	Mouse	DNA Binding	17877	A2RSK4
Myh8	myosin, heavy polypeptide 8, skeletal muscle, perinatal	Mouse	DNA Binding	17885	P13542
Myt1	myelin transcription factor 1	Mouse	DNA Binding	17932	B0R0C1
Myt1l	myelin transcription factor 1-like	Mouse	DNA Binding	17933	P97500
N28178	expressed sequence N28178	Mouse	DNA Binding	230085	A2AG27
Naa35	N(alpha)-acetyltransferase 35, NatC auxiliary subunit	Mouse	DNA Binding	78689	Q6PHQ8
Nanos2	nanos homolog 2 (Drosophila)	Mouse	DNA Binding	378430	I6ZHM2
Napb	N-ethylmaleimide sensitive fusion protein attachment protein beta	Mouse	DNA Binding	17957	A2APW8
Napepld	N-acyl phosphatidylethanolamine phospholipase D	Mouse	DNA Binding	242864	Q8BH82
Ndnl2	necdin-like 2	Mouse	DNA Binding	66647	Q9CPR8
Ndrg1	N-myc downstream regulated gene 1	Mouse	DNA Binding	17988	Q545R3
Neil1	nei endonuclease VIII-like 1 (E. coli)	Mouse	DNA Binding	72774	Q8K4Q6
NELL2	NEL-like 2 (chicken)	Human	Protein Binding	4753	Q99435
Nenf	neuron derived neurotrophic factor	Mouse	DNA Binding	66208	Q9CQ45
Neo1	neogenin	Mouse	DNA Binding	18007	Q7TQG5
Nfe2l3	nuclear factor, erythroid derived 2, like 3	Mouse	DNA Binding	18025	Q3UZC1
Nfib	nuclear factor I/B	Mouse	DNA Binding	18028	P97863
Nid2	nidogen 2	Mouse	DNA Binding	18074	O88322
Nipal4	NIPA-like domain containing 4	Mouse	DNA Binding	214112	Q8BZF2
Nkx2-1	NK2 homeobox 1	Mouse	DNA Binding	21869	P50220
Nms	neuromedin S	Mouse	DNA Binding	433292	Q5H8A1
Nox4	NADPH oxidase 4	Mouse	DNA Binding	50490	B2RSM1
Nppc	natriuretic peptide type C	Mouse	DNA Binding	18159	Q544K5
Npy6r	neuropeptide Y receptor Y6	Mouse	DNA Binding	18169	Q61212
Nr4a1	nuclear receptor subfamily 4, group A, member 1	Mouse	DNA Binding	15370	P12813
Nr4a2	nuclear receptor subfamily 4, group A, member 2	Mouse	DNA Binding	18227	Q06219
Nrbp2	nuclear receptor binding protein 2	Mouse	DNA Binding	223649	Q91V36
Nrl	neural retina leucine zipper gene	Mouse	DNA Binding	18185	P54846
Nt5c1b	5'-nucleotidase, cytosolic IB	Mouse	DNA Binding	70881	Q91YE9
Ntng1	netrin G1	Mouse	DNA Binding	80883	Q8R4G0
Ntsr2	neurotensin receptor 2	Mouse	DNA Binding	18217	P70310
Nub1	negative regulator of ubiquitin-like proteins 1	Mouse	DNA Binding	53312	P54729
Nudt16	nudix (nucleoside diphosphate linked moiety X)-type motif 16	Mouse	DNA Binding	75686	Q6P3D0
Nxf1	nuclear RNA export factor 1	Mouse	DNA Binding	53319	Q99JX7
Nxt2	nuclear transport factor 2-like export factor 2	Mouse	DNA Binding	237082	Q3UNA4
Ocln	occludin	Mouse	DNA Binding	18260	B2RS24
Odam	odontogenic, ameloblast asssociated	Mouse	DNA Binding	69592	A1E960
Odf3l1	outer dense fiber of sperm tails 3-like 1	Mouse	DNA Binding	382075	Q810P2
Odz4	odd Oz/ten-m homolog 4 (Drosophila)	Mouse	DNA Binding	23966	Q3UHK6
Olfm3	olfactomedin 3	Mouse	DNA Binding	229759	P63056
Olfml3	olfactomedin-like 3	Mouse	DNA Binding	99543	Q8BK62
Olig3	oligodendrocyte transcription factor 3	Mouse	DNA Binding	94222	Q6PFG8
Onecut1	one cut domain, family member 1	Mouse	DNA Binding	15379	O08755
Oosp1	oocyte secreted protein 1	Mouse	DNA Binding	170834	Q925U0
Orf61	open reading frame 61	Mouse	DNA Binding	216157	Q8CIV2
Ormdl3	ORM1-like 3 (S. cerevisiae)	Mouse	DNA Binding	66612	Q9CPZ6
Otp	orthopedia homolog (Drosophila)	Mouse	DNA Binding	18420	O09113
Otx1	orthodenticle homolog 1 (Drosophila)	Mouse	DNA Binding	18423	P80205
Ovol1	OVO homolog-like 1 (Drosophila)	Mouse	DNA Binding	18426	Q9WTJ2
Oxr1	oxidation resistance 1	Mouse	DNA Binding	170719	Q4KMM3
P2rx1	purinergic receptor P2X, ligand-gated ion channel, 1	Mouse	DNA Binding	18436	B2KG89
P2rx7	purinergic receptor P2X, ligand-gated ion channel, 7	Mouse	DNA Binding	18439	Q3UN00
P2ry10	purinergic receptor P2Y, G-protein coupled 10	Mouse	DNA Binding	78826	Q8BFU7
Padi1	peptidyl arginine deiminase, type I	Mouse	DNA Binding	18599	Q544I4
Palmd	palmdelphin	Mouse	DNA Binding	114301	Q3UVT7
Pank1	pantothenate kinase 1	Mouse	DNA Binding	75735	Q8K4K6
Parm1	prostate androgen-regulated mucin-like protein 1	Mouse	DNA Binding	231440	Q923D3
Parp12	poly (ADP-ribose) polymerase family, member 12	Mouse	DNA Binding	243771	Q8BZ20
Parp8	poly (ADP-ribose) polymerase family, member 8	Mouse	DNA Binding	52552	F8WIK2
Patl1	protein associated with topoisomerase II homolog 1 (yeast)	Mouse	DNA Binding	225929	Q3TC46
Pax1	paired box gene 1	Mouse	DNA Binding	18503	P09084
Pbld	phenazine biosynthesis-like protein domain containing 1	Mouse	DNA Binding	68371	Q9DCG6
Pcdhac2	protocadherin alpha subfamily C, 2	Mouse	DNA Binding	353237	Q91Y09
Pcdhb10	protocadherin beta 10	Mouse	DNA Binding	93881	Q91VE5
Pcdhb5	protocadherin beta 5	Mouse	DNA Binding	93876	Q8CEA8
Pcdhgc4	protocadherin gamma subfamily C, 4	Mouse	DNA Binding	93707	Q91XX0
Pcgf3	polycomb group ring finger 3	Mouse	DNA Binding	69587	Q8BTQ0
Pcnxl4	pecanex-like 4 (Drosophila)	Mouse	DNA Binding	67708	E9QN69
Pde10a	phosphodiesterase 10A	Mouse	DNA Binding	23984	Q8CA95
Pde1a	phosphodiesterase 1A, calmodulin-dependent	Mouse	DNA Binding	18573	Q9JLL9
Pde3a	phosphodiesterase 3A, cGMP inhibited	Mouse	DNA Binding	54611	B2RR84
Pde6b	phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide	Mouse	DNA Binding	18587	P23440
Pde8b	phosphodiesterase 8B	Mouse	DNA Binding	218461	E9PYP0
Pdgfrl	platelet-derived growth factor receptor-like	Mouse	DNA Binding	68797	Q6PE55
Pdk3	pyruvate dehydrogenase kinase, isoenzyme 3	Mouse	DNA Binding	236900	Q4FJR4
Pdss1	prenyl (solanesyl) diphosphate synthase, subunit 1	Mouse	DNA Binding	56075	Q33DR2
Pdzd9	PDZ domain containing 9	Mouse	DNA Binding	67983	B9EJT5
Peg10	paternally expressed 10	Mouse	DNA Binding	170676	Q7TN75
Pgf	placental growth factor	Mouse	DNA Binding	18654	P49764
Phf19	PHD finger protein 19	Mouse	DNA Binding	74016	Q9CXG9
Phkg2	phosphorylase kinase, gamma 2 (testis)	Mouse	DNA Binding	68961	Q9DB30
Phlda1	pleckstrin homology-like domain, family A, member 1	Mouse	DNA Binding	21664	Q62392
Phox2a	paired-like homeobox 2a	Mouse	DNA Binding	11859	Q62066
Phtf2	putative homeodomain transcription factor 2	Mouse	DNA Binding	68770	Q8C9D2
Phyh	phytanoyl-CoA hydroxylase	Mouse	DNA Binding	16922	O35386
Pias1	protein inhibitor of activated STAT 1	Mouse	DNA Binding	56469	O88907
Pibf1	progesterone immunomodulatory binding factor 1	Mouse	DNA Binding	52023	E9Q6K3
PICK1	protein interacting with PRKCA 1	Human	Protein Binding	9463	Q9NRD5
Pigr	polymeric immunoglobulin receptor	Mouse	DNA Binding	18703	O70570
Pik3r3	phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55)	Mouse	DNA Binding	18710	Q3UXE9
Pitpnb	phosphatidylinositol transfer protein, beta	Mouse	DNA Binding	56305	P53811
Pkhd1l1	polycystic kidney and hepatic disease 1-like 1	Mouse	DNA Binding	192190	Q80ZA4
PKM2	pyruvate kinase, muscle	Human	Protein Binding	5315	P14618
Pkp4	plakophilin 4	Mouse	DNA Binding	227937	Q68FH0
Pla2g15	phospholipase A2, group XV	Mouse	DNA Binding	192654	Q8VEB4
Pla2g7	phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)	Mouse	DNA Binding	27226	Q60963
Plac1	placental specific protein 1	Mouse	DNA Binding	56096	B1B0W9
Plac9	placenta specific 9	Mouse	DNA Binding	211623	Q8K262
Plec1	plectin	Mouse	DNA Binding	18810	E9QN87
Plekhf1	pleckstrin homology domain containing, family F (with FYVE domain) member 1	Mouse	DNA Binding	72287	Q3TB82
Plekhg5	pleckstrin homology domain containing, family G (with RhoGef domain) member 5	Mouse	DNA Binding	269608	B1AS68
Plekhg6	pleckstrin homology domain containing, family G (with RhoGef domain) member 6	Mouse	DNA Binding	213522	Q8R0J1
Pls3	plastin 3 (T-isoform)	Mouse	DNA Binding	102866	Q3UJG9
Plscr2	phospholipid scramblase 2	Mouse	DNA Binding	18828	Q9DCW2
Plxnd1	plexin D1	Mouse	DNA Binding	67784	Q3UH93
Pmaip1	phorbol-12-myristate-13-acetate-induced protein 1	Mouse	DNA Binding	58801	Q9JM54
Pnmt	phenylethanolamine-N-methyltransferase	Mouse	DNA Binding	18948	P40935
Poc1b	POC1 centriolar protein homolog B (Chlamydomonas)	Mouse	DNA Binding	382406	Q8BHD1
Polk	polymerase (DNA directed), kappa	Mouse	DNA Binding	27015	Q9QUG2
Polr2j	polymerase (RNA) II (DNA directed) polypeptide J	Mouse	DNA Binding	20022	Q3TYI2
Polr3e	polymerase (RNA) III (DNA directed) polypeptide E	Mouse	DNA Binding	26939	Q9CZT4
Por	P450 (cytochrome) oxidoreductase	Mouse	DNA Binding	18984	P37040
Pot1a	protection of telomeres 1A	Mouse	DNA Binding	101185	Q91WC1
Pou1f1	POU domain, class 1, transcription factor 1	Mouse	DNA Binding	18736	Q00286
Pou4f2	POU domain, class 4, transcription factor 2	Mouse	DNA Binding	18997	Q63934
Pou4f3	POU domain, class 4, transcription factor 3	Mouse	DNA Binding	18998	Q63955
Ppap2a	phosphatidic acid phosphatase type 2A	Mouse	DNA Binding	19012	Q61469
Ppap2b	phosphatidic acid phosphatase type 2B	Mouse	DNA Binding	67916	B1ASM1
Pparg	peroxisome proliferator activated receptor gamma	Mouse	DNA Binding	19016	P37238
Ppargc1a	peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	Mouse	DNA Binding	19017	O70343
Ppfibp2	PTPRF interacting protein, binding protein 2 (liprin beta 2)	Mouse	DNA Binding	19024	O35711
Ppp1r3a	protein phosphatase 1, regulatory (inhibitor) subunit 3A	Mouse	DNA Binding	140491	Q99MR9
Ppp2r1a	protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), alpha isoform	Mouse	DNA Binding	51792	Q76MZ3
Ppp3cc	protein phosphatase 3, catalytic subunit, gamma isoform	Mouse	DNA Binding	19057	P48455
Pqlc1	PQ loop repeat containing 1	Mouse	DNA Binding	66943	Q80XM9
Prc1	protein regulator of cytokinesis 1	Mouse	DNA Binding	233406	G3UW86
Prdm8	PR domain containing 8	Mouse	DNA Binding	77630	B2RU90
Prkd3	protein kinase D3	Mouse	DNA Binding	75292	Q5FWX6
Prkrir	protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	Mouse	DNA Binding	72981	Q9CUX1
Prl	prolactin	Mouse	DNA Binding	19109	Q3TT66
Prl5a1	prolactin family 5, subfamily a, member 1	Mouse	DNA Binding	28078	Q9JII2
Prl8a6	prolactin family 8, subfamily a, member 6	Mouse	DNA Binding	19112	Q9DAY2
Prl8a9	prolactin family8, subfamily a, member 9	Mouse	DNA Binding	67310	Q9CQ58
Prmt6	protein arginine N-methyltransferase 6	Mouse	DNA Binding	99890	Q6NZB1
Prosapip1	ProSAPiP1 protein	Mouse	DNA Binding	241638	A2AHG0
Prpf39	PRP39 pre-mRNA processing factor 39 homolog (yeast)	Mouse	DNA Binding	328110	E9QJV4
Prph	peripherin	Mouse	DNA Binding	19132	G5E846
Prpsap1	phosphoribosyl pyrophosphate synthetase-associated protein 1	Mouse	DNA Binding	67763	B1AT82
Prss12	protease, serine, 12 neurotrypsin (motopsin)	Mouse	DNA Binding	19142	O08762
Prss58	protease, serine 58	Mouse	DNA Binding	232717	Q8BW11
Psd3	pleckstrin and Sec7 domain containing 3	Mouse	DNA Binding	234353	E9PUC5
Psma1	proteasome (prosome, macropain) subunit, alpha type 1	Mouse	DNA Binding	26440	Q3TS44
Psmd7	proteasome (prosome, macropain) 26S subunit, non-ATPase, 7	Mouse	DNA Binding	17463	A1L3B8
Ptch1	patched homolog 1	Mouse	DNA Binding	19206	Q61115
Ptcra	pre T cell antigen receptor alpha	Mouse	DNA Binding	19208	P0C6B2
Ptger4	prostaglandin E receptor 4 (subtype EP4)	Mouse	DNA Binding	19219	Q91VE4
Ptgr1	prostaglandin reductase 1	Mouse	DNA Binding	67103	A2ALW3
Ptpn4	protein tyrosine phosphatase, non-receptor type 4	Mouse	DNA Binding	19258	G5E8E7
Pxt1	peroxisomal, testis specific 1	Mouse	DNA Binding	69307	B2KF08
Pzp	pregnancy zone protein	Mouse	DNA Binding	11287	Q61838
Rab15	RAB15, member RAS oncogene family	Mouse	DNA Binding	104886	Q3TYB1
Rab21	RAB21, member RAS oncogene family	Mouse	DNA Binding	216344	P35282
Rab2b	RAB2B, member RAS oncogene family	Mouse	DNA Binding	76338	P59279
Rab39b	RAB39B, member RAS oncogene family	Mouse	DNA Binding	67790	Q0PD14
Rab3ip	RAB3A interacting protein	Mouse	DNA Binding	216363	Q68EF0
Rab43	RAB43, member RAS oncogene family	Mouse	DNA Binding	69834	Q0PD10
Rab5a	RAB5A, member RAS oncogene family	Mouse	DNA Binding	271457	Q9CQD1
Rad54l2	RAD54 like 2 (S. cerevisiae)	Mouse	DNA Binding	81000	E9QKL0
Ralb	v-ral simian leukemia viral oncogene homolog B (ras related)	Mouse	DNA Binding	64143	Q8CCG5
Ranbp10	RAN binding protein 10	Mouse	DNA Binding	74334	Q6VN19
Ranbp3	RAN binding protein 3	Mouse	DNA Binding	71810	Q9CT10
Rapgef3	Rap guanine nucleotide exchange factor (GEF) 3	Mouse	DNA Binding	223864	Q3UQC2
Rasgef1b	RasGEF domain family, member 1B	Mouse	DNA Binding	320292	Q8JZL7
Rassf5	Ras association (RalGDS/AF-6) domain family member 5	Mouse	DNA Binding	54354	Q5EBH1
Rbbp5	retinoblastoma binding protein 5	Mouse	DNA Binding	213464	Q8BX09
Rbm26	RNA binding motif protein 26	Mouse	DNA Binding	74213	E9PUF4
Rbm38	RNA binding motif protein 38	Mouse	DNA Binding	56190	Q62176
Rbm42	RNA binding motif protein 42	Mouse	DNA Binding	68035	Q91V81
Rbm47	RNA binding motif protein 47	Mouse	DNA Binding	245945	Q91WT8
Rbms2	RNA binding motif, single stranded interacting protein 2	Mouse	DNA Binding	56516	E9Q7G6
Rcl1	RNA terminal phosphate cyclase-like 1	Mouse	DNA Binding	59028	Q9JJT0
Rcor1	REST corepressor 1	Mouse	DNA Binding	217864	Q8CFE3
Rdh11	retinol dehydrogenase 11	Mouse	DNA Binding	17252	Q9QYF1
Reps1	RalBP1 associated Eps domain containing protein	Mouse	DNA Binding	19707	E9Q632
Rexo1	REX1, RNA exonuclease 1 homolog (S. cerevisiae)	Mouse	DNA Binding	66932	Q7TT28
Rffl	ring finger and FYVE like domain containing protein	Mouse	DNA Binding	67338	Q3TEV8
Rmi1	RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)	Mouse	DNA Binding	74386	Q9D4G9
Rnft2	ring finger protein, transmembrane 2	Mouse	DNA Binding	269695	Q3UF64
Rpe	ribulose-5-phosphate-3-epimerase	Mouse	DNA Binding	66646	B2KGE9
Rpl21	ribosomal protein L21	Mouse	DNA Binding	19933	Q9CQM8
Rps27l	ribosomal protein S27-like	Mouse	DNA Binding	67941	Q6ZWY3
Rpusd4	RNA pseudouridylate synthase domain containing 4	Mouse	DNA Binding	71989	Q9CWX4
Rraga	Ras-related GTP binding A	Mouse	DNA Binding	68441	Q80X95
Rragb	Ras-related GTP binding B	Mouse	DNA Binding	245670	Q6NTA4
Rrp1b	ribosomal RNA processing 1 homolog B (S. cerevisiae)	Mouse	DNA Binding	72462	Q91YK2
Rspo3	R-spondin 3 homolog (Xenopus laevis)	Mouse	DNA Binding	72780	Q2TJ95
Rtn4r	reticulon 4 receptor	Mouse	DNA Binding	65079	Q99PI8
Rtp1	receptor transporter protein 1	Mouse	DNA Binding	239766	B2RSL5
Rtp2	receptor transporter protein 2	Mouse	DNA Binding	224055	Q80ZI2
Rwdd1	RWD domain containing 1	Mouse	DNA Binding	66521	Q9CQK7
S1pr5	sphingosine-1-phosphate receptor 5	Mouse	DNA Binding	94226	Q91X56
Saa1	serum amyloid A 1	Mouse	DNA Binding	20208	P05366
Sall3	sal-like 3 (Drosophila)	Mouse	DNA Binding	20689	Q62255
Samd5	sterile alpha motif domain containing 5	Mouse	DNA Binding	320825	Q3V1H9
Sars	seryl-aminoacyl-tRNA synthetase	Mouse	DNA Binding	20226	P26638
Sbf1	SET binding factor 1	Mouse	DNA Binding	77980	Q6ZPE2
Sbk1	SH3-binding kinase 1	Mouse	DNA Binding	104175	Q8QZX0
Scfd2	Sec1 family domain containing 2	Mouse	DNA Binding	212986	Q3UPD0
Scoc	short coiled-coil protein	Mouse	DNA Binding	56367	Q78YZ6
Sdc3	syndecan 3	Mouse	DNA Binding	20970	B1ASF5
Sdc4	syndecan 4	Mouse	DNA Binding	20971	O35988
Sdr39u1	short chain dehydrogenase/reductase family 39U, member 1	Mouse	DNA Binding	654795	Q5M8N4
Sdr42e1	short chain dehydrogenase/reductase family 42E, member 1	Mouse	DNA Binding	74032	Q9D665
Sema3c	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C	Mouse	DNA Binding	20348	Q62181
Sema3g	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G	Mouse	DNA Binding	218877	Q4LFA9
Sema6a	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	Mouse	DNA Binding	20358	O35464
Serp1	stress-associated endoplasmic reticulum protein 1	Mouse	DNA Binding	28146	Q9Z1W5
Serpina10	serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10	Mouse	DNA Binding	217847	Q8R121
Serpinb7	serine (or cysteine) peptidase inhibitor, clade B, member 7	Mouse	DNA Binding	116872	Q6P3F8
Serpinb9c	serine (or cysteine) peptidase inhibitor, clade B, member 9c	Mouse	DNA Binding	20707	I7HJI5
Serpini2	serine (or cysteine) peptidase inhibitor, clade I, member 2	Mouse	DNA Binding	67931	Q4G0D3
SETD2	SET domain containing 2	Human	Protein Binding	29072	Q9BYW2
Setd5	SET domain containing 5	Mouse	DNA Binding	72895	Q5XJV7
Setd6	SET domain containing 6	Mouse	DNA Binding	66083	Q9CWY3
Sf1	splicing factor 1	Mouse	DNA Binding	22668	Q64213
Sf3a2	splicing factor 3a, subunit 2	Mouse	DNA Binding	20222	G3UVU2
Sfrs1	serine/arginine-rich splicing factor 1	Mouse	DNA Binding	110809	Q6PDM2
Sfrs12	splicing regulatory glutamine/lysine-rich protein 1	Mouse	DNA Binding	218543	Q8BZX4
Sfrs5	serine/arginine-rich splicing factor 5	Mouse	DNA Binding	20384	O35326
Sfrs7	serine/arginine-rich splicing factor 7	Mouse	DNA Binding	225027	Q3THA6
Sfxn5	sideroflexin 5	Mouse	DNA Binding	94282	Q925N0
Sh3tc2	SH3 domain and tetratricopeptide repeats 2	Mouse	DNA Binding	225608	Q3UPD8
Shoc2	soc-2 (suppressor of clear) homolog (C. elegans)	Mouse	DNA Binding	56392	O88520
Shox2	short stature homeobox 2	Mouse	DNA Binding	20429	P70390
Shroom3	shroom family member 3	Mouse	DNA Binding	27428	Q9QXN0
Siah1b	seven in absentia 1B	Mouse	DNA Binding	20438	A2AHZ2
Siglec5	sialic acid binding Ig-like lectin 5	Mouse	DNA Binding	233186	B7ZN64
Sike1	suppressor of IKBKE 1	Mouse	DNA Binding	66641	Q9CPR7
Six6os1	RIKEN cDNA 4930447C04 gene	Mouse	DNA Binding	75801	Q9CTN5
Skint10	selection and upkeep of intraepithelial T cells 10	Mouse	DNA Binding	230613	Q8CA07
Skint11	selection and upkeep of intraepithelial T cells 11	Mouse	DNA Binding	230623	A7XV14
Sla2	Src-like-adaptor 2	Mouse	DNA Binding	77799	A2AVZ2
Slc10a5	solute carrier family 10 (sodium/bile acid cotransporter family), member 5	Mouse	DNA Binding	241877	Q5PT54
Slc10a7	solute carrier family 10 (sodium/bile acid cotransporter family), member 7	Mouse	DNA Binding	76775	Q5PT53
Slc12a5	solute carrier family 12, member 5	Mouse	DNA Binding	57138	Q91V14
Slc16a10	solute carrier family 16 (monocarboxylic acid transporters), member 10	Mouse	DNA Binding	72472	Q3U9N9
Slc16a4	solute carrier family 16 (monocarboxylic acid transporters), member 4	Mouse	DNA Binding	229699	Q8R0M8
Slc1a1	solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	Mouse	DNA Binding	20510	P51906
Slc22a23	solute carrier family 22, member 23	Mouse	DNA Binding	73102	Q3UHH2
Slc26a1	solute carrier family 26 (sulfate transporter), member 1	Mouse	DNA Binding	231583	P58735
Slc2a13	solute carrier family 2 (facilitated glucose transporter), member 13	Mouse	DNA Binding	239606	Q3UHK1
Slc2a2	solute carrier family 2 (facilitated glucose transporter), member 2	Mouse	DNA Binding	20526	P14246
Slc2a3	solute carrier family 2 (facilitated glucose transporter), member 3	Mouse	DNA Binding	20527	P32037
Slc2a9	solute carrier family 2 (facilitated glucose transporter), member 9	Mouse	DNA Binding	117591	B9EHN5
Slc35d1	solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	Mouse	DNA Binding	242585	Q8BX24
Slc35e1	solute carrier family 35, member E1	Mouse	DNA Binding	270066	Q8CD26
Slc43a3	solute carrier family 43, member 3	Mouse	DNA Binding	58207	A2AVZ9
Slc46a2	solute carrier family 46, member 2	Mouse	DNA Binding	30936	Q8CA03
Slc46a3	solute carrier family 46, member 3	Mouse	DNA Binding	71706	Q9DC26
Slc47a1	solute carrier family 47, member 1	Mouse	DNA Binding	67473	Q8K0H1
Slc48a1	solute carrier family 48 (heme transporter), member 1	Mouse	DNA Binding	67739	Q9D8M3
Slc4a4	solute carrier family 4 (anion exchanger), member 4	Mouse	DNA Binding	54403	O88343
Slc52a3	solute carrier protein family 52, member 3	Mouse	DNA Binding	69698	Q9D6X5
Slc6a2	solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2	Mouse	DNA Binding	20538	O55192
Slc6a20	solute carrier family 6 (neurotransmitter transporter), member 20B	Mouse	DNA Binding	22599	O88575
Slc6a5	solute carrier family 6 (neurotransmitter transporter, glycine), member 5	Mouse	DNA Binding	104245	B2RQX9
Slc7a5	solute carrier family 7 (cationic amino acid transporter, y+ system), member 5	Mouse	DNA Binding	20539	Q9Z127
Slit2	slit homolog 2 (Drosophila)	Mouse	DNA Binding	20563	Q9R1B9
Smad1	MAD homolog 1 (Drosophila)	Mouse	DNA Binding	17125	P70340
Smad4	SMAD family member 4	Mouse	DNA Binding	17128	P97471
Smc6	structural maintenance of chromosomes 6	Mouse	DNA Binding	67241	Q924W5
Smu1	smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)	Mouse	DNA Binding	74255	B1AXY3
Snapap	SNAP-associated protein	Mouse	DNA Binding	20615	Q9Z266
Snf1lk	salt inducible kinase 1	Mouse	DNA Binding	17691	Q60670
Snf8	SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae)	Mouse	DNA Binding	27681	Q9CZ28
Snrp70	small nuclear ribonucleoprotein 70 (U1)	Mouse	DNA Binding	20637	A2RS68
Snrpb	small nuclear ribonucleoprotein B	Mouse	DNA Binding	20638	A2APD4
Snrpn	small nuclear ribonucleoprotein N	Mouse	DNA Binding	20646	P63163
Snx15	sorting nexin 15	Mouse	DNA Binding	69024	Q91WE1
Snx2	sorting nexin 2	Mouse	DNA Binding	67804	Q9CWK8
Snx30	sorting nexin family member 30	Mouse	DNA Binding	209131	Q8CE50
Sod1	superoxide dismutase 1, soluble	Mouse	DNA Binding	20655	P08228
Sox8	SRY-box containing gene 8	Mouse	DNA Binding	20681	Q04886
Spag16	sperm associated antigen 16	Mouse	DNA Binding	66722	Q8K450
Spag9	sperm associated antigen 9	Mouse	DNA Binding	70834	Q58A65
Spata16	spermatogenesis associated 16	Mouse	DNA Binding	70862	Q8C636
Spic	Spi-C transcription factor (Spi-1/PU.1 related)	Mouse	DNA Binding	20728	Q6P3D7
Spock3	sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	Mouse	DNA Binding	72902	Q8BKV0
Sprr2e	small proline-rich protein 2E	Mouse	DNA Binding	20759	O70556
Sprr2f	small proline-rich protein 2F	Mouse	DNA Binding	20760	O70557
Sptssa	serine palmitoyltransferase, small subunit A	Mouse	DNA Binding	104725	Q8R207
Sptssb	serine palmitoyltransferase, small subunit B	Mouse	DNA Binding	66183	Q925E8
Spty2d1	SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)	Mouse	DNA Binding	101685	Q68FG3
Srpx	sushi-repeat-containing protein	Mouse	DNA Binding	51795	Q9R0M3
Srrm3	serine/arginine repetitive matrix 3	Mouse	DNA Binding	58212	Q80WV7
Stag3	stromal antigen 3	Mouse	DNA Binding	50878	O70576
Stam2	signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	Mouse	DNA Binding	56324	O88811
Stk11	serine/threonine kinase 11	Mouse	DNA Binding	20869	Q9WTK7
Stmn4	stathmin-like 4	Mouse	DNA Binding	56471	P63042
Stox2	storkhead box 2	Mouse	DNA Binding	71069	Q499E5
Stx8	syntaxin 8	Mouse	DNA Binding	55943	O88983
Sucnr1	succinate receptor 1	Mouse	DNA Binding	84112	Q99MT6
Sult2b1	sulfotransferase family, cytosolic, 2B, member 1	Mouse	DNA Binding	54200	O35400
Susd4	sushi domain containing 4	Mouse	DNA Binding	96935	Q8BH32
Svs4	seminal vesicle secretory protein 4	Mouse	DNA Binding	20941	P18419
Syt15	synaptotagmin XV	Mouse	DNA Binding	319508	Q8C6N3
Tas2r102	taste receptor, type 2, member 102	Mouse	DNA Binding	387339	F8VPL4
Tas2r113	taste receptor, type 2, member 113	Mouse	DNA Binding	387345	Q7M711
Tas2r125	taste receptor, type 2, member 125	Mouse	DNA Binding	387352	Q7M710
Tas2r129	taste receptor, type 2, member 129	Mouse	DNA Binding	387354	Q7M709
Tceal8	transcription elongation factor A (SII)-like 8	Mouse	DNA Binding	66684	Q9CZY2
Tcerg1	transcription elongation regulator 1 (CA150)	Mouse	DNA Binding	56070	Q3TH57
Tcf1	transcription factor 12	Mouse	DNA Binding	21406	Q3UZ69
Tcl1	T cell lymphoma breakpoint 1	Mouse	DNA Binding	21432	P56280
Tcp11l2	t-complex 11 (mouse) like 2	Mouse	DNA Binding	216198	Q8K1H7
Tekt1	tektin 1	Mouse	DNA Binding	21689	Q5NBU4
Tgfb3	transforming growth factor, beta 3	Mouse	DNA Binding	21809	Q91YU7
Tgfbi	transforming growth factor, beta induced	Mouse	DNA Binding	21810	A1L353
Th	tyrosine hydroxylase	Mouse	DNA Binding	21823	P24529
Thbs4	thrombospondin 4	Mouse	DNA Binding	21828	B2RTL6
Themis	thymocyte selection associated	Mouse	DNA Binding	210757	Q8BGW0
Thnsl2	threonine synthase-like 2 (bacterial)	Mouse	DNA Binding	232078	Q80W22
Timm8a1	translocase of inner mitochondrial membrane 8 homolog a1 (yeast)	Mouse	DNA Binding	30058	B1AV37
Tiparp	TCDD-inducible poly(ADP-ribose) polymerase	Mouse	DNA Binding	99929	Q8C1B2
Tle1	transducin-like enhancer of split 1, homolog of Drosophila E(spl)	Mouse	DNA Binding	21885	Q62440
Tmc7	transmembrane channel-like gene family 7	Mouse	DNA Binding	209760	Q8C428
Tmcc2	transmembrane and coiled-coil domains 2	Mouse	DNA Binding	68875	Q80W04
Tmco4	transmembrane and coiled-coil domains 4	Mouse	DNA Binding	77056	Q91WU4
Tmed9	transmembrane emp24 protein transport domain containing 9	Mouse	DNA Binding	67511	Q6PDC2
Tmeff2	transmembrane protein with EGF-like and two follistatin-like domains 2	Mouse	DNA Binding	56363	Q9QYM9
Tmem136	transmembrane protein 136	Mouse	DNA Binding	235300	Q3TYE7
Tmem150B	transmembrane protein 150B	Mouse	DNA Binding	330460	Q8R218
Tmem154	transmembrane protein 154	Mouse	DNA Binding	320782	Q8C4Q9
Tmem200a	transmembrane protein 200A	Mouse	DNA Binding	77220	B2RUN2
Tmem222	transmembrane protein 222	Mouse	DNA Binding	52174	Q8BVA2
Tmem232	transmembrane protein 232	Mouse	DNA Binding	381107	Q5K6N0
Tmem246	transmembrane protein 246	Mouse	DNA Binding	67063	A2AKL1
Tmem35	transmembrane protein 35	Mouse	DNA Binding	67564	B1AV87
Tmem65	transmembrane protein 65	Mouse	DNA Binding	74868	Q4VAE3
Tmem67	transmembrane protein 67	Mouse	DNA Binding	329795	E9QNI1
Tmem90a	transmembrane protein 90a	Mouse	DNA Binding	627191	B2RRM8
Tmod1	tropomodulin 1	Mouse	DNA Binding	21916	P49813
Tnfaip8l2	tumor necrosis factor, alpha-induced protein 8-like 2	Mouse	DNA Binding	69769	Q9D8Y7
Tnfrsf19	tumor necrosis factor receptor superfamily, member 19	Mouse	DNA Binding	29820	Q8BUM7
Tnfsf18	tumor necrosis factor (ligand) superfamily, member 18	Mouse	DNA Binding	240873	Q7TS55
Tnpo2	transportin 2 (importin 3, karyopherin beta 2b)	Mouse	DNA Binding	212999	Q99LG2
Tob1	transducer of ErbB-2.1	Mouse	DNA Binding	22057	Q640M3
Tpbpa	trophoblast specific protein alpha	Mouse	DNA Binding	21984	Q9CPR0
Tpbpb	trophoblast specific protein beta	Mouse	DNA Binding	116913	Q9CQC0
Tpd52	tumor protein D52	Mouse	DNA Binding	21985	F8WHQ1
Tph1	tryptophan hydroxylase 1	Mouse	DNA Binding	21990	P17532
Tpp2	tripeptidyl peptidase II	Mouse	DNA Binding	22019	Q64514
Tppp3	tubulin polymerization-promoting protein family member 3	Mouse	DNA Binding	67971	Q9CRB6
Trdmt1	tRNA aspartic acid methyltransferase 1	Mouse	DNA Binding	13434	O55055
Tril	TLR4 interactor with leucine-rich repeats	Mouse	DNA Binding	66873	Q9DBY4
Trim40	tripartite motif-containing 40	Mouse	DNA Binding	195359	Q3UWA4
Trim44	tripartite motif-containing 44	Mouse	DNA Binding	80985	Q4KMS1
Trp53bp1	transformation related protein 53 binding protein 1	Mouse	DNA Binding	27223	A2AU91
Trp53inp2	transformation related protein 53 inducible nuclear protein 2	Mouse	DNA Binding	68728	Q8CFU8
Trps1	trichorhinophalangeal syndrome I (human)	Mouse	DNA Binding	83925	G3UW90
Tspan2	tetraspanin 2	Mouse	DNA Binding	70747	Q9D1X8
Tspan32	tetraspanin 32	Mouse	DNA Binding	27027	Q9JHH2
Tspan4	tetraspanin 4	Mouse	DNA Binding	64540	Q4FJW7
Tspan7	tetraspanin 7	Mouse	DNA Binding	21912	Q62283
Tspyl1	testis-specific protein, Y-encoded-like 1	Mouse	DNA Binding	22110	O88852
Tst	thiosulfate sulfurtransferase, mitochondrial	Mouse	DNA Binding	22117	P52196
Ttc3	tetratricopeptide repeat domain 3	Mouse	DNA Binding	22129	O88196
Ttc32	tetratricopeptide repeat domain 32	Mouse	DNA Binding	75516	Q9DAC7
Ttk	Ttk protein kinase	Mouse	DNA Binding	22137	Q8BY97
Txn1	thioredoxin 1	Mouse	DNA Binding	22166	A2AV97
Txndc3	NME/NM23 family member 8	Mouse	DNA Binding	73412	Q715T0
Uaca	uveal autoantigen with coiled-coil domains and ankyrin repeats	Mouse	DNA Binding	72565	Q8CGB3
Ubqln4	ubiquilin 4	Mouse	DNA Binding	94232	Q99NB8
Ubr7	ubiquitin protein ligase E3 component n-recognin 7 (putative)	Mouse	DNA Binding	66622	Q52KC0
Ubxn4	UBX domain protein 4	Mouse	DNA Binding	67812	Q8C0Z0
Ucn	urocortin	Mouse	DNA Binding	22226	P81615
Ugt2a2	UDP glucuronosyltransferase 2 family, polypeptide A2	Mouse	DNA Binding	552899	Q6PDD0
Ugt2b37	UDP glucuronosyltransferase 2 family, polypeptide B37	Mouse	DNA Binding	112417	Q8VCN3
Unc50	unc-50 homolog (C. elegans)	Mouse	DNA Binding	67387	Q9CQ61
Unc5d	unc-5 homolog D (C. elegans)	Mouse	DNA Binding	210801	Q8K1S2
Uncx	UNC homeobox	Mouse	DNA Binding	22255	O08934
Upp2	uridine phosphorylase 2	Mouse	DNA Binding	76654	Q3UEN1
Use1	unconventional SNARE in the ER 1 homolog (S. cerevisiae)	Mouse	DNA Binding	67023	E9Q496
Usp3	ubiquitin specific peptidase 3	Mouse	DNA Binding	235441	Q91W36
Usp53	ubiquitin specific peptidase 53	Mouse	DNA Binding	99526	P15975
Usp8	ubiquitin specific peptidase 8	Mouse	DNA Binding	84092	A2AI52
Utp6	UTP6, small subunit (SSU) processome component, homolog (yeast)	Mouse	DNA Binding	216987	Q8VCY6
V1rc19	vomeronasal 1 receptor 5	Mouse	DNA Binding	171192	B2RQT2
V1rc20	vomeronasal 1 receptor 6	Mouse	DNA Binding	171193	Q8R2D4
V1rd1	vomeronasal 1 receptor 63	Mouse	DNA Binding	81017	Q9EPT1
V1rd15	vomeronasal 1 receptor 183	Mouse	DNA Binding	209824	Q8K3N5
V1rd2	vomeronasal 1 receptor 62	Mouse	DNA Binding	81016	Q8R2C0
V1rd20	vomeronasal 1 receptor 181	Mouse	DNA Binding	404289	Q0P547
V1rf2	vomeronasal 1 receptor 235	Mouse	DNA Binding	171233	Q8R297
V1rh13	vomeronasal 1 receptor 219	Mouse	DNA Binding	171272	Q8R271
V1rh21	vomeronasal 1 receptor 197	Mouse	DNA Binding	171278	Q8R265
V1ri1	vomeronasal 1 receptor 192	Mouse	DNA Binding	252907	Q8K4C9
Vars	valyl-tRNA synthetase	Mouse	DNA Binding	22321	Q9Z1Q9
Vat1	vesicle amine transport protein 1 homolog (T californica)	Mouse	DNA Binding	26949	Q499X4
Vnn1	vanin 1	Mouse	DNA Binding	22361	Q9Z0K8
Vps4b	vacuolar protein sorting 4b (yeast)	Mouse	DNA Binding	20479	P46467
Vti1b	vesicle transport through interaction with t-SNAREs 1B homolog	Mouse	DNA Binding	53612	Q91XH6
Vwa2	von Willebrand factor A domain containing 2	Mouse	DNA Binding	240675	Q70UZ7
Wasf1	WASP family 1	Mouse	DNA Binding	83767	Q8R5H6
Wbscr27	Williams Beuren syndrome chromosome region 27 (human)	Mouse	DNA Binding	79565	Q8BGM4
Wdr17	WD repeat domain 17	Mouse	DNA Binding	244484	Q8C8Y2
Wdr25	WD repeat domain 25	Mouse	DNA Binding	212198	E9Q349
Wfdc1	WAP four-disulfide core domain 1	Mouse	DNA Binding	67866	Q3UQ76
Wfs1	Wolfram syndrome 1 homolog (human)	Mouse	DNA Binding	22393	P56695
Wrap53	WD repeat containing, antisense to TP53	Mouse	DNA Binding	216853	Q8VC51
Xpo7	exportin 7	Mouse	DNA Binding	65246	Q9EPK7
Yme1l1	YME1-like 1 (S. cerevisiae)	Mouse	DNA Binding	27377	A2AQY3
Zbtb41	zinc finger and BTB domain containing 41 homolog	Mouse	DNA Binding	226470	Q811F1
Zbtb7c	zinc finger and BTB domain containing 7C	Mouse	DNA Binding	207259	Q8VCZ7
Zc3h12d	zinc finger CCCH type containing 12D	Mouse	DNA Binding	237256	E9QNR7
Zc3hav1l	zinc finger CCCH-type, antiviral 1-like	Mouse	DNA Binding	209032	B9EHM1
Zdhhc2	zinc finger, DHHC domain containing 2	Mouse	DNA Binding	70546	P59267
Zdhhc9	zinc finger, DHHC domain containing 9	Mouse	DNA Binding	208884	B1AVD4
Zer1	zer-1 homolog (C. elegans)	Mouse	DNA Binding	227693	Q80ZJ6
Zfand6	zinc finger, AN1-type domain 6	Mouse	DNA Binding	65098	Q9DCH6
Zfhx4	zinc finger homeodomain 4	Mouse	DNA Binding	80892	Q9JJN2
Zfp238	zinc finger protein 238	Mouse	DNA Binding	30928	H7BX69
Zfp358	zinc finger protein 358	Mouse	DNA Binding	140482	E9Q8M1
Zfp369	zinc finger protein 369	Mouse	DNA Binding	170936	F8VQL6
Zfp36l2	zinc finger protein 36, C3H type-like 2	Mouse	DNA Binding	12193	B9EIF6
Zfp39	zinc finger protein 39	Mouse	DNA Binding	22698	Q02525
Zfp408	zinc finger protein 408	Mouse	DNA Binding	381410	Q3V1D8
Zfp64	zinc finger protein 64	Mouse	DNA Binding	22722	A2AQR4
Zfp688	zinc finger protein 688	Mouse	DNA Binding	69234	E9Q5M9
Zfp69	zinc finger protein 69	Mouse	DNA Binding	381549	A2A761
Zfp75	zinc finger protein 317	Mouse	DNA Binding	244713	Q0P5V5
Zfpm2	zinc finger protein, multitype 2	Mouse	DNA Binding	22762	Q8CCH7
Zhx2	zinc fingers and homeoboxes 2	Mouse	DNA Binding	387609	Q8C0C0
Zic5	zinc finger protein of the cerebellum 5	Mouse	DNA Binding	65100	Q7TQ40
Zim1	zinc finger, imprinted 1	Mouse	DNA Binding	22776	Q6NZC6
Zpbp	zona pellucida binding protein	Mouse	DNA Binding	53604	B7ZP49
Zranb1	zinc finger, RAN-binding domain containing 1	Mouse	DNA Binding	360216	Q7M760
Zrsr2	zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2	Mouse	DNA Binding	22184	B1B0E8
Zscan30	zinc finger and SCAN domain containing 30	Mouse	DNA Binding	328918	N/A

Human Gene Module / Chromosome X / ARX

ARXaristaless related homeobox

SFARI Gene Score

Autism Reports / Total Reports

Rare Variants / Common Variants

EAGLE Score

Aliases

Associated Syndromes

Chromosome Band

Associated Disorders

Genetic Category

Relevance to Autism

Molecular Function

External Links

Human

Mouse

Zebrafish

SFARI Genomic Platforms

Reports related to ARX (27 Reports)

Rare Variants (57)

Common Variants

SFARI Gene score

High Confidence, Syndromic

Score Delta: Score remained at 1S

criteria met

High Confidence

Syndromic

4/1/2021

Score remained at 1

Description

Reports Added

4/1/2020

Score remained at 1

Description

Reports Added

10/1/2019

Increased from S to 1

New Scoring Scheme

Description

Reports Added

4/1/2019

Increased from S to S

Description

Reports Added

7/1/2017

Increased from S to S

Description

Reports Added

4/1/2017

Increased from S to S

Description

Reports Added

1/1/2017

Increased from S to S

Description

Reports Added

1/1/2016

Increased from S to S

Description

Reports Added

4/1/2015

Increased from S to S

Description

Reports Added

4/1/2014

Increased from No data to S

Description

Reports Added

Krishnan Probability Score

Score 0.41594966117007

Ranking 21412/25841 scored genes

ExAC Score

Score 0.75306908332634

Ranking 4196/18225 scored genes

Sanders TADA Score

Score 0.9183935086211

Ranking 8814/18665 scored genes

Zhang D Score

Score 0.095186436387251

Ranking 6236/20870 scored genes