ASTN1astrotactin 1
Autism Reports / Total Reports
4 / 6Rare Variants / Common Variants
20 / 0Aliases
-Associated Syndromes
-Chromosome Band
1q25.2Associated Disorders
-Relevance to Autism
Levine et al., 2026 described eighteen individuals from twelve unrelated families with biallelic, ultra-rare, predicted damaging variants in ASTN1 and one individual with heterozygous variants in both ASTN1 and ASTN2 presenting with a variable neurodevelopmental disorder characterized by mild to profound developmental delay or intellectual disability, autism or autistic features, ADHD, epilepsy, dysmorphic facial features, hypotonia, spasticity, ataxia, and structural brain abnormalities. A homozygous missense variant in the ASTN1 gene was previously identified in an ASD proband born to consanguineous Middle Eastern parents in Tuncay et al., 2022, while additional de novo heterozygous variants in the ASTN1 gene, including a de novo loss-of-function variant and several de novo missense variants, have been reported in ASD probands from the iHART cohort, the SPARK cohort, and a Chinese ASD cohort (Ruzzo et al., 2019; Zhou et al., 2022; Yuan et al., 2023).
Molecular Function
Astrotactin is a neuronal adhesion molecule required for glial-guided migration of young postmitotic neuroblasts in cortical regions of developing brain, including cerebrum, hippocampus, cerebellum, and olfactory bulb.
External Links
SFARI Genomic Platforms
Reports related to ASTN1 (6 Reports)
| # | Type | Title | Author, Year | Autism Report | Associated Disorders |
|---|---|---|---|---|---|
| 1 | Support | Inherited and De Novo Genetic Risk for Autism Impacts Shared Networks | Ruzzo EK , et al. (2019) | Yes | - |
| 2 | Support | - | Tuncay IO et al. (2022) | Yes | ADHD, DD, ID |
| 3 | Support | - | Zhou X et al. (2022) | Yes | - |
| 4 | Support | - | Yuan B et al. (2023) | Yes | - |
| 5 | Support | - | Akif Ayaz et al. (2025) | No | - |
| 6 | Primary | - | Jesse M Levine et al. (2026) | No | ASD or autistic features, ADHD |
Rare Variants (20)
| Status | Allele Change | Residue Change | Variant Type | Inheritance Pattern | Parental Transmission | Family Type | PubMed ID | Author, Year |
|---|---|---|---|---|---|---|---|---|
| c.1599-14G>A | - | intron_variant | Unknown | - | Simplex | 41544630 | Jesse M Levine et al. (2026) | |
| c.177del | p.Ser60ArgfsTer90 | frameshift_variant | De novo | - | - | 36881370 | Yuan B et al. (2023) | |
| c.1245T>C | p.His415= | synonymous_variant | De novo | - | Simplex | 35982159 | Zhou X et al. (2022) | |
| c.3299C>T | p.Pro1100Leu | missense_variant | De novo | - | Unknown | 35982159 | Zhou X et al. (2022) | |
| c.1270+1G>A | - | splice_site_variant | Unknown | - | Simplex | 41544630 | Jesse M Levine et al. (2026) | |
| c.2773A>G | p.Met925Val | missense_variant | De novo | - | Multiplex | 35982159 | Zhou X et al. (2022) | |
| c.1446C>G | p.Cys482Trp | missense_variant | De novo | - | Multiplex | 31398340 | Ruzzo EK , et al. (2019) | |
| c.1549C>T | p.Arg517Ter | stop_gained | Familial | Both parents | Simplex | 39667727 | Akif Ayaz et al. (2025) | |
| c.1523+1G>T | - | splice_site_variant | Familial | Both parents | Simplex | 41544630 | Jesse M Levine et al. (2026) | |
| c.1736+5G>A | - | splice_site_variant | Familial | Both parents | Simplex | 41544630 | Jesse M Levine et al. (2026) | |
| c.2770C>T | p.His924Tyr | missense_variant | Familial | Maternal | Simplex | 41544630 | Jesse M Levine et al. (2026) | |
| c.2773A>G | p.Met925Val | missense_variant | Familial | Paternal | Simplex | 41544630 | Jesse M Levine et al. (2026) | |
| c.3283A>C | p.Met1095Leu | missense_variant | Familial | Both parents | Simplex | 35190550 | Tuncay IO et al. (2022) | |
| c.3283A>C | p.Met1095Leu | missense_variant | Familial | Paternal | Simplex | 41544630 | Jesse M Levine et al. (2026) | |
| c.1132C>T | p.Arg378Ter | stop_gained | Familial | Both parents | Multiplex | 41544630 | Jesse M Levine et al. (2026) | |
| c.838_839delGA | p.Glu280LysfsTer11 | frameshift_variant | Unknown | - | Simplex | 41544630 | Jesse M Levine et al. (2026) | |
| c.2224G>C | p.Gly742Arg | missense_variant | Familial | Both parents | Multiplex | 41544630 | Jesse M Levine et al. (2026) | |
| c.3334C>T | p.Arg1112Ter | stop_gained | Familial | Both parents | Extended multiplex | 41544630 | Jesse M Levine et al. (2026) | |
| c.3125delAinsGACCACAAGTG | p.Glu1042GlyfsTer28 | frameshift_variant | Unknown | - | Simplex | 41544630 | Jesse M Levine et al. (2026) | |
| c.3159_3160del | p.Gln1053HisfsTer13 | frameshift_variant | Familial | Both parents | Multiplex | 41544630 | Jesse M Levine et al. (2026) |
Common Variants
No common variants reported.