DNM1dynamin 1
Autism Reports / Total Reports
5 / 11Rare Variants / Common Variants
33 / 0Aliases
-Associated Syndromes
-Chromosome Band
9q34.11Associated Disorders
-Relevance to Autism
A de novo missense variant in the DNM1 gene was identified in an ASD proband from the SPARK proband (Feliciano et al., 2019), while a damaging missense variant in this gene was identified in three ASD-affected siblings from the BARAKA-Qatar study and their father, who was diagnosed with ADHD and presented with autistic features (Abdi et al., 2023). Additional loss-of-function and damaging missense variants in DNM1 were reported in individuals from ASD and developmental delay cohorts in Wang et al., 2020. One of the five individuals with DNM1-related autosomal dominant developmental and epileptic encephalopathy described in EuroEPINOMICS-RES Consortium 2014 was reported to have autism spectrum disorder, while both individuals with DNM1-related autosomal recessive developmental and epileptic encephalopathy described in Yigit et al., 2022 were reported to present with stereotypical movements. A de novo missense variant in DNM1 was identified in twin siblings presenting with diagnoses of autism spectrum disorder, developmental delay, and intellectual disability without epileptic encephalopathy in Brereton et al., 2018, while a de novo missense variant in this gene was reported in a adult male with autism, intellectual disability, and mild epilepsy in Mei et al., 2023.
Molecular Function
This gene encodes a member of the dynamin subfamily of GTP-binding proteins. The encoded protein possesses unique mechanochemical properties used to tubulate and sever membranes, and is involved in clathrin-mediated endocytosis and other vesicular trafficking processes. Actin and other cytoskeletal proteins act as binding partners for the encoded protein, which can also self-assemble leading to stimulation of GTPase activity. Heterozygous and homozygous mutations in this gene are responsible for autosomal dominant and autosomal recessive forms of developmental and epileptic encephalopathy, respectively (EuroEPINOMICS-RES Consortium 2014; Deciphering Developmental Disorders Study 2015; Yigit et al., 2022; AlTassan et al., 2022).
External Links
SFARI Genomic Platforms
Reports related to DNM1 (11 Reports)
# | Type | Title | Author, Year | Autism Report | Associated Disorders |
---|---|---|---|---|---|
1 | Support | De novo mutations in synaptic transmission genes including DNM1 cause epileptic encephalopathies | EuroEPINOMICS-RES Consortium , et al. (2014) | No | ASD |
2 | Support | Large-scale discovery of novel genetic causes of developmental disorders | Deciphering Developmental Disorders Study (2014) | No | - |
3 | Support | - | Emily Brereton et al. (2018) | Yes | - |
4 | Support | Exome sequencing of 457 autism families recruited online provides evidence for autism risk genes | Feliciano P et al. (2019) | Yes | - |
5 | Support | Large-scale targeted sequencing identifies risk genes for neurodevelopmental disorders | Wang T et al. (2020) | Yes | - |
6 | Support | - | Gökhan Yigit et al. (2022) | No | Stereotypy |
7 | Support | - | Ruqaiah AlTassan et al. (2022) | No | - |
8 | Support | - | Davide Mei et al. () | Yes | - |
9 | Primary | - | Mona Abdi et al. (2023) | Yes | ADHD |
10 | Support | - | Purvi Majethia et al. (2024) | No | DD |
11 | Support | - | Axel Schmidt et al. (2024) | No | - |
Rare Variants (33)
Status | Allele Change | Residue Change | Variant Type | Inheritance Pattern | Parental Transmission | Family Type | PubMed ID | Author, Year |
---|---|---|---|---|---|---|---|---|
c.1335+1701C>T | - | stop_gained | Unknown | - | - | 33004838 | Wang T et al. (2020) | |
c.766C>T | p.Arg256Ter | stop_gained | Familial | - | - | 33004838 | Wang T et al. (2020) | |
c.1261C>T | p.Arg421Ter | stop_gained | Familial | - | - | 33004838 | Wang T et al. (2020) | |
c.1622dup | p.Tyr541Ter | stop_gained | Familial | - | - | 33004838 | Wang T et al. (2020) | |
c.199C>T | p.Arg67Cys | missense_variant | Unknown | - | - | 33004838 | Wang T et al. (2020) | |
c.596G>T | p.Arg199Leu | missense_variant | Unknown | - | - | 33004838 | Wang T et al. (2020) | |
c.709C>T | p.Arg237Trp | missense_variant | Unknown | - | - | 33004838 | Wang T et al. (2020) | |
c.788C>T | p.Pro263Leu | missense_variant | Unknown | - | - | 33004838 | Wang T et al. (2020) | |
c.812G>A | p.Arg271His | missense_variant | Unknown | - | - | 33004838 | Wang T et al. (2020) | |
c.889C>T | p.Arg297Trp | missense_variant | Unknown | - | - | 33004838 | Wang T et al. (2020) | |
c.1037G>A | p.Gly346Asp | missense_variant | Unknown | - | - | 33004838 | Wang T et al. (2020) | |
c.1268C>T | p.Pro423Leu | missense_variant | Unknown | - | - | 33004838 | Wang T et al. (2020) | |
c.1291G>A | p.Val431Ile | missense_variant | Unknown | - | - | 33004838 | Wang T et al. (2020) | |
c.1300G>A | p.Glu434Lys | missense_variant | Unknown | - | - | 33004838 | Wang T et al. (2020) | |
c.1394G>A | p.Arg465Gln | missense_variant | Unknown | - | - | 33004838 | Wang T et al. (2020) | |
c.1994T>C | p.Leu665Pro | missense_variant | De novo | - | - | 37132416 | Davide Mei et al. () | |
c.1154G>A | p.Arg385Gln | missense_variant | Familial | - | - | 33004838 | Wang T et al. (2020) | |
c.1197-8G>A | - | splice_region_variant | De novo | - | - | 38374498 | Purvi Majethia et al. (2024) | |
c.1660A>G | p.Lys554Glu | missense_variant | De novo | - | - | 31452935 | Feliciano P et al. (2019) | |
c.1180A>G | p.Asn394Asp | missense_variant | De novo | - | - | 39039281 | Axel Schmidt et al. (2024) | |
c.97C>T | p.Gln33Ter | stop_gained | Familial | Both parents | Simplex | 34172529 | Gökhan Yigit et al. (2022) | |
c.796C>T | p.Arg266Cys | missense_variant | Familial | Paternal | Multiplex | 37805537 | Mona Abdi et al. (2023) | |
c.850C>T | p.Gln284Ter | stop_gained | Familial | Both parents | Simplex | 34172529 | Gökhan Yigit et al. (2022) | |
c.194C>A | p.Thr65Asn | missense_variant | De novo | - | Simplex | 25262651 | EuroEPINOMICS-RES Consortium , et al. (2014) | |
c.529G>C | p.Ala177Pro | missense_variant | De novo | - | Simplex | 25262651 | EuroEPINOMICS-RES Consortium , et al. (2014) | |
c.618G>C | p.Lys206Asn | missense_variant | De novo | - | Simplex | 25262651 | EuroEPINOMICS-RES Consortium , et al. (2014) | |
c.709C>T | p.Arg237Trp | missense_variant | De novo | - | Simplex | 25262651 | EuroEPINOMICS-RES Consortium , et al. (2014) | |
c.1076G>C | p.Gly359Ala | missense_variant | De novo | - | Simplex | 25262651 | EuroEPINOMICS-RES Consortium , et al. (2014) | |
c.865A>T | p.Ile289Phe | missense_variant | De novo | - | Simplex | 25533962 | Deciphering Developmental Disorders Study (2014) | |
c.709C>T | p.Arg237Trp | missense_variant | De novo | - | Unknown | 25533962 | Deciphering Developmental Disorders Study (2014) | |
c.1186C>G | p.His396Asp | missense_variant | De novo | - | Simplex | 25533962 | Deciphering Developmental Disorders Study (2014) | |
c.1603A>G | p.Lys535Glu | missense_variant | De novo | - | Multiplex (monozygotic twins) | 29397573 | Emily Brereton et al. (2018) | |
c.350del | p.Pro117ArgfsTer14 | frameshift_variant | Familial | Both parents | Simplex | 36553519 | Ruqaiah AlTassan et al. (2022) |
Common Variants
No common variants reported.
SFARI Gene score
Suggestive Evidence
Score Delta: Score remained at 3
criteria met
See SFARI Gene'scoring criteriaThe literature is replete with relatively small studies of candidate genes, using either common or rare variant approaches, which do not reach the criteria set out for categories 1 and 2. Genes that had two such lines of supporting evidence were placed in category 3, and those with one line of evidence were placed in category 4. Some additional lines of "accessory evidence" (indicated as "acc" in the score cards) could also boost a gene from category 4 to 3.
1/1/2024
Increased from to 3
Krishnan Probability Score
Score 0.56936662424081
Ranking 1038/25841 scored genes
[Show Scoring Methodology]
ExAC Score
Score 0.99986383931626
Ranking 726/18225 scored genes
[Show Scoring Methodology]
Sanders TADA Score
Score 0.94178402462613
Ranking 15061/18665 scored genes
[Show Scoring Methodology]
Zhang D Score
Score 0.42618499754193
Ranking 1164/20870 scored genes
[Show Scoring Methodology]