Human Gene Module / Chromosome 2 / DPYSL5

DPYSL5dihydropyrimidinase like 5

SFARI Gene Score
3
Suggestive Evidence Criteria 3.1
Autism Reports / Total Reports
1 / 3
Rare Variants / Common Variants
9 / 0
Aliases
-
Associated Syndromes
Ritscher-Schinzel syndrome 4, DD, ID
Chromosome Band
2p23.3
Associated Disorders
-
Relevance to Autism

Desprez et al., 2025 reported six different missense variants in the DPYSL5 gene (including the previously identified p.Glu41Lys recurrent variant that was experimentally confirmed as a loss-of-function variant in Jeanne et al., 2021) in three male fetuses and six individuals aged up to 10 years old; all living participants in this cohort had developmental delay (6/6), predominantly in language (5/6), and mild to severe intellectual disability (5/5), while four of these individuals had autism spectrum disorder. Subsequent functional assays of novel DPYSL5 missense variants in differentiating mouse or human neuronal cultures in Desprez et al., 2025 revealed impairments in dendritic arborization, axonal elongation, and synaptic density. Of the nine individuals with Ritscher-Schinzel syndrome 4 reported in Jeanne et al., 2021, ASD was reported in one and stereotypic movements were reported in two others. A de novo missense variant in the DPYSL5 gene was identified in an ASD proband from the Autism Sequencing Consortium (De Rubeis et al., 2014).

Molecular Function

This gene encodes a member of the CRMP (collapsing response mediator protein) family thought to be involved in neural development. Antibodies to the encoded protein were found in some patients with neurologic symptoms who had paraneoplastic syndrome. Heterozygous variants in the DPYSL5 gene are responsible for Ritscher-Schinzel syndrome 4 (OMIM 619435), a disorder characterized by a constellation of congenital anomalies, including dysmorphic craniofacial features and structural brain anomalies, associated with global developmental delay and impaired intellectual development (Jeanne et al., 2021).

SFARI Genomic Platforms
Reports related to DPYSL5 (3 Reports)
# Type Title Author, Year Autism Report Associated Disorders
1 Support Synaptic, transcriptional and chromatin genes disrupted in autism De Rubeis S , et al. (2014) Yes -
2 Support - Médéric Jeanne et al. (2021) No ASD, stereotypy, epilepsy/seizures
3 Primary - Florence Desprez et al. () No ASD
Rare Variants   (9)
Status Allele Change Residue Change Variant Type Inheritance Pattern Parental Transmission Family Type PubMed ID Author, Year
c.1090G>A p.Val364Ile missense_variant De novo - - 25363760 De Rubeis S , et al. (2014)
c.73G>A p.Glu25Lys missense_variant De novo - Simplex 41286434 Florence Desprez et al. ()
c.121G>A p.Glu41Lys missense_variant De novo - Simplex 41286434 Florence Desprez et al. ()
c.757G>T p.Ala253Ser missense_variant De novo - Simplex 41286434 Florence Desprez et al. ()
c.692G>A p.Arg231His missense_variant Unknown - Unknown 41286434 Florence Desprez et al. ()
c.121G>A p.Glu41Lys missense_variant De novo - - 33894126 Médéric Jeanne et al. (2021)
c.1060C>T p.Arg354Cys missense_variant De novo - Simplex 41286434 Florence Desprez et al. ()
c.1562G>A p.Arg521Gln missense_variant De novo - Simplex 41286434 Florence Desprez et al. ()
c.139G>A p.Gly47Arg missense_variant De novo (germline mosaicism) - Multiplex 33894126 Médéric Jeanne et al. (2021)
Common Variants  

No common variants reported.

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