Human Gene Module / Chromosome 16 / MTSS2

MTSS2MTSS I-BAR domain containing 2

SFARI Gene Score
S
Syndromic Syndromic
Autism Reports / Total Reports
3 / 6
Rare Variants / Common Variants
12 / 0
Aliases
-
Associated Syndromes
-
Chromosome Band
16q22.1
Associated Disorders
-
Relevance to Autism

A number of de novo variants in the MTSS2 gene, including a de novo loss-of-function (LoF) variant and several de novo missense variants, have been identified in ASD probands (Satterstrom et al., 2020; Zhou et al., 2022; Trost et al., 2022). Huang et al., 2022 described a cohort of five unrelated individuals with a recurrent de novo MTSS2 missense variant (c.2011C>T;p.Arg671Trp) presenting with a neurodevelopmental syndrome [Intellectual developmental disorder with ocular anomalies and distinctive facial features (IDDOF); OMIM 620086] characterized by global developmental delay and/or mild intellectual disability, ophthalmological anomalies, distinctive facial features (upslanting palpebral fissures, epicanthus, and bitemporal narrowing), and microcephaly; autism spectrum disorder was diagnosed in two of the three individuals from this cohort who were old enough to be evaluated. Functional analysis of the recurrent p.Arg617Trp missense variant in Drosophila in Huang et al., 2022 demonstrated a partial loss-of-function effect and increased toxicity compared to wild-type MTSS2, suggesting that this variant may act as a dominant-negative allele. A female ASD proband from the SPARK cohort was also found to have the functionally validated de novo p.Arg617Trp missense variant (Zhou et al., 2022).

Molecular Function

Enables GTPase activator activity and small GTPase binding activity. Involved in activation of GTPase activity and cellular response to platelet-derived growth factor stimulus. Located in ruffle membrane.

SFARI Genomic Platforms
Reports related to MTSS2 (6 Reports)
# Type Title Author, Year Autism Report Associated Disorders
1 Primary Large-Scale Exome Sequencing Study Implicates Both Developmental and Functional Changes in the Neurobiology of Autism Satterstrom FK et al. (2020) Yes -
2 Support - Zhou X et al. (2022) Yes -
3 Recent Recommendation - Huang Y et al. (2022) No ASD, ADHD
4 Support - Trost B et al. (2022) Yes -
5 Support - Corona-Rivera JR et al. (2023) No -
6 Support - Angela De Dominicis et al. () No ADHD, epilepsy/seizures
Rare Variants   (12)
Status Allele Change Residue Change Variant Type Inheritance Pattern Parental Transmission Family Type PubMed ID Author, Year
c.290+38A>C - intron_variant De novo - - 36368308 Trost B et al. (2022)
c.132-36del - intron_variant De novo - - 31981491 Satterstrom FK et al. (2020)
c.517G>A p.Asp173Asn missense_variant De novo - - 35982159 Zhou X et al. (2022)
c.2011C>T p.Arg671Trp missense_variant De novo - - 35982159 Zhou X et al. (2022)
c.2011C>T p.Arg671Trp missense_variant De novo - - 36067766 Huang Y et al. (2022)
c.1826G>A p.Arg609Gln missense_variant De novo - - 36368308 Trost B et al. (2022)
c.132-1G>C - splice_site_variant De novo - - 31981491 Satterstrom FK et al. (2020)
c.1726C>T p.Arg576Cys missense_variant De novo - Simplex 35982159 Zhou X et al. (2022)
c.2011C>T p.Arg671Trp missense_variant De novo - Simplex 36067766 Huang Y et al. (2022)
c.2011C>T p.Arg671Trp missense_variant De novo - - 39890443 Angela De Dominicis et al. ()
c.2011C>T p.Arg671Trp missense_variant Unknown - - 39890443 Angela De Dominicis et al. ()
c.2011C>T p.Arg671Trp missense_variant Unknown Not maternal Simplex 37657631 Corona-Rivera JR et al. (2023)
Common Variants  

No common variants reported.

SFARI Gene score
S

Syndromic

Score Delta: Score remained at S

The syndromic category includes mutations that are associated with a substantial degree of increased risk and consistently linked to additional characteristics not required for an ASD diagnosis. If there is independent evidence implicating a gene in idiopathic ASD, it will be listed as "#S" (e.g., 2S, 3S, etc.). If there is no such independent evidence, the gene will be listed simply as "S."

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